Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 140 5e-28 seq8 113 7e-20 >seq5 Length=1086982 Score = 140 bits (154), Expect = 5e-28 Identities = 573/883 (65%), Gaps = 29/883 (3%) Strand=Plus/Minus Query 124984 GTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTC 125043 |||||||| || || || |||| || ||||| |||||| || ||| || | || Sbjct 839663 GTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAG 839604 Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 |||| || || ||||||| ||||||| | ||||| || ||||| | | |||||| | | Sbjct 839603 AGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAATA 839544 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163 ||| ||| ||| | || || || || || | | |||||||||||||| | || Sbjct 839543 ACCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCT 839484 Query 125164 CCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA 125222 | ||||| || || || || ||| | ||||| | ||| | ||| || |||||| Sbjct 839483 CTGATGGTATAGTAAATGAGAATTTAGTTGAGA-ATTTCAGTGCAGAAGTGCAAATTCCA 839425 Query 125223 GAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTAC 125282 || | || || || || |||||||||||||| || ||| | ||||| || | || Sbjct 839424 GAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTAT 839365 Query 125283 TCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGC 125341 || | ||||| | || || ||||| || | || | | | | || || || Sbjct 839364 TCCCTGTTAATTGATACTTATATCAAGGATCC-AAAGGAAAGCGATTTCTTATTCAATGC 839306 Query 125342 AATCGACACGGTGCCGTCTATACGTAAA---AAGGCTCAATGGGTGATTCGGTGGATCGA 125398 || || | | || || | | |||| ||||| |||||| || | ||||| | Sbjct 839305 GATTGAAAACATTCC-TC-AGA-TTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCA 839249 Query 125399 TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTT 125458 ||| | ||| | ||| || ||| |||| || ||||| ||| | || || || Sbjct 839248 GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGTTATTT 839189 Query 125459 CTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACT 125518 |||||| ||| ||||| || ||||| ||| | |||||| || || ||||| || || Sbjct 839188 CTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCT 839129 Query 125519 GACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCT 125578 ||| |||||| || || | |||| || || |||| || ||||| ||| Sbjct 839128 AACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATGTCT 839069 Query 125579 ACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACAT 125638 ||| ||| || || || || ||||||| | || | || || || Sbjct 839068 ACTATTT-GC--TCATTTGAAGAATAAG-CCAGATCCTTCCATTA-----TCGAAAAGAT 839018 Query 125639 TGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC-TAACCGAATCCCTACCGGTCAGCA 125697 | | || || ||||| ||| ||| ||||| | | | | ||| | ||||| || | Sbjct 839017 TATTACTGAAGCCGTCGAGATCGAA-AAGAGGTACTTCATCGATGCTCTACCCGT-TTCT 838960 Query 125698 TGATT-GGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTA 125756 | ||| || |||||| | | || ||| | ||||| | ||||| || || ||| | ||| Sbjct 838959 TTATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGACTA 838900 Query 125757 CTGTACGAGTTGATTGGCCGCAAGA---TTTACAACGCCAAGAATCCCTTTGATTTCATG 125813 ||| || | | || ||||| ||| ||||| | || || |||||||||||| Sbjct 838899 CTGGTCGCTT---TCGGGAACAAGAAATTTTTCAACGTGACTAACCCATTTGATTTCATG 838843 Query 125814 ACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGA 125856 | ||| || || | ||||||||||| |||||||| |||| Sbjct 838842 GAGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGA 838800 >seq8 Length=833973 Score = 113 bits (124), Expect = 7e-20 Identities = 316/475 (67%), Gaps = 10/475 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || ||| ||||||| ||| | || | ||||||||||| |||||||| ||| Sbjct 325996 CAAGGTGGTAACAAAAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGAC 325937 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 | ||||| || || || || || || ||| || |||||| || || || || Sbjct 325936 ATCTTTGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAGAGATTCGTGCAAGAGAT 325877 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 ||||| || |||||| | ||||||||||||||||| || || | || ||| | Sbjct 325876 TTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAA 325817 Query 97056 TGGAGCCTAATGTGCCCCGACT-CGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTT 97114 |||| | | | | || | | | || ||| |||| ||| | || || || || Sbjct 325816 TGGA-CTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATT 325758 Query 97115 TGAGGCCAAGTA--CACGGCCTACG-AGCAAGAGGGC-CGATACGTGAGACGAGTCGATG 97170 ||| ||| ||| ||| |||| || ||| | | || | |||| | || | | Sbjct 325757 TGAAGCCTTGTATGAACG--TTACGTCGCTGAAGGTCGTGGTA-GAAAGACTA-TCAAAG 325702 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | | |||||||| | || ||| || |||| ||||||||| ||||| | ||| | Sbjct 325701 CTCAAAAACTGTGGTACGCTATCTTGGAATCTCAAACAGAGACTGGTACTCCATTCATGC 325642 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||| ||| || ||| || ||||||||| ||||||| ||||| || || Sbjct 325641 TTTACAAAGATGCCTGTAATATAAAGAGCAACCAAAAGAACTTGGGTACCATTAAATCCT 325582 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 | || |||| ||||| || |||||| | | || || ||||| || ||||| Sbjct 325581 CTAACTTGTGTTGTGAAATCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTG 325527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059125894080