Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq6 91.5 1e-13
seq2 89.7 4e-13
seq7 82.4 6e-11
>seq6
Length=1070623
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || || | ||||| || | || ||||| ||||| |||||||| || |
Sbjct 959800 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 959741
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || |||||||||||| || || ||| | || | || ||||| || ||
Sbjct 959740 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 959681
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| || || ||||| || || || || | | ||| || || || ||| |
Sbjct 959680 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 959621
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| |||||| || || |||||||| || ||||| ||||||||||| ||
Sbjct 959620 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571
>seq2
Length=1354397
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || || | ||||| ||||| || ||||| ||||| |||||||| ||| |
Sbjct 395816 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 395757
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || ||||||||||| || || ||| | || | || ||||| || ||
Sbjct 395756 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 395697
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| ||| ||| || || | | ||| || || || ||| |
Sbjct 395696 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 395637
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200
|||| || ||||| || || ||||| || ||||| |||
Sbjct 395636 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 395598
>seq7
Length=946563
Score = 82.4 bits (90), Expect = 6e-11
Identities = 165/244 (68%), Gaps = 3/244 (1%)
Strand=Plus/Minus
Query 19965 ATATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTT 20024
||||| |||| || || || || || ||||| |||| ||| | |||||||| || |
Sbjct 343652 ATATACTTTAACAA---CCACCACGCAATCTCAAAACCAGATGCAAGGTAGATTCCTTCT 343596
Query 20025 GTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCC 20084
| |||||||||||| | |||| | |||||| | ||| || || || | || | |
Sbjct 343595 GGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATC 343536
Query 20085 TCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAG 20144
|||| ||||| || | || || || || ||| || || || | | ||| ||
Sbjct 343535 TCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGAATCTTACTCTTGACATTGTCAATAG 343476
Query 20145 AATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTT 20204
|||| || ||| ||| | || || || || ||||| || || ||||||||||| |
Sbjct 343475 TATCGGAAGATTCGACTTCTAAAGTTATAGTCTTACCGGTTAAAGTCTTGACAAAAATCT 343416
Query 20205 GCAT 20208
||||
Sbjct 343415 GCAT 343412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419587159090248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |