Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq5 188 6e-43
>seq5
Length=1086982
Score = 188 bits (208), Expect = 6e-43
Identities = 555/841 (66%), Gaps = 41/841 (5%)
Strand=Plus/Plus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| ||||| ||||| || || || || | | ||| || || ||||| ||||| ||
Sbjct 838796 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 838855
Query 12935 GGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992
|| || || || | | |||| || ||| || | | | | ||| ||||| |
Sbjct 838856 GGGTTAGTC--ACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGA 838913
Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052
| ||||| | |||||| ||||| | || |||||| || | ||| || || | ||
Sbjct 838914 CGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAG 838973
Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112
| || | || | | ||||| || || || ||||| ||| || ||| |
Sbjct 838974 CATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAAT----CTT------T 839023
Query 13113 TCTCTAATGGA-GGATTTGATAGATGCTT---------AAACATCATACATGCAAAATCA 13162
|| ||||||| |||| || || ||| ||| | | ||||||||||||
Sbjct 839024 TCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCG 839083
Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222
|| || ||||||||||| | || | ||||| ||||| |||||||| ||||| ||
Sbjct 839084 GTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGA 839143
Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaa-aaaTATTCCTTCAAC 13281
||| || || | ||| || ||||||||||| ||||| ||||| ||||| |||||||
Sbjct 839144 CCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATA-ACCTTCAAT 839202
Query 13282 TGCTGCAAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACT---CTCTATCCACT 13337
|| || || || | ||| || || | || | || || ||| || |||||
Sbjct 839203 GGCAGCGAAAGCAACCAATCTCTC----TGCGAAGATAGATTCACTGTCCTGAATCCATC 839258
Query 13338 TTCTGGCCCAGTTTGCTTTTTGTTTAA-CGCAGTTCATATTTTCTATTGCGTTAAATAAA 13396
| | ||||| | || || | ||||| | || || ||||| || || || |||||
Sbjct 839259 TGATAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCAATCGCATTGAATAAG 839317
Query 13397 TAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAA 13456
||| ||||||| || ||||||||||| || || | | ||| | |||||
Sbjct 839318 AAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAG 839377
Query 13457 TGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACT 13516
||||| ||||||||| |||||||||||||| |||||| |||| |||| | || |||
Sbjct 839378 TGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACT 839437
Query 13517 TC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaa 13575
|| | | | |||| | || |||| || || || ||||| || ||| |||||||| ||
Sbjct 839438 TCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAA 839496
Query 13576 aGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-AC--TTTAACCAATCTGG 13632
|| | | | || || | ||||||| || || || || |||||| |
Sbjct 839497 GGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATG 839556
Query 13633 AAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692
|| ||| || |||| ||| | ||| || | ||||| || ||||| | || |||||||
Sbjct 839557 AATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATA 839616
Query 13693 C 13693
|
Sbjct 839617 C 839617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982357979216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |