Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq5 188 6e-43 >seq5 Length=1086982 Score = 188 bits (208), Expect = 6e-43 Identities = 555/841 (66%), Gaps = 41/841 (5%) Strand=Plus/Plus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| ||||| ||||| || || || || | | ||| || || ||||| ||||| || Sbjct 838796 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 838855 Query 12935 GGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992 || || || || | | |||| || ||| || | | | | ||| ||||| | Sbjct 838856 GGGTTAGTC--ACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGA 838913 Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052 | ||||| | |||||| ||||| | || |||||| || | ||| || || | || Sbjct 838914 CGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAG 838973 Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112 | || | || | | ||||| || || || ||||| ||| || ||| | Sbjct 838974 CATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAAT----CTT------T 839023 Query 13113 TCTCTAATGGA-GGATTTGATAGATGCTT---------AAACATCATACATGCAAAATCA 13162 || ||||||| |||| || || ||| ||| | | |||||||||||| Sbjct 839024 TCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCG 839083 Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222 || || ||||||||||| | || | ||||| ||||| |||||||| ||||| || Sbjct 839084 GTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGA 839143 Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaa-aaaTATTCCTTCAAC 13281 ||| || || | ||| || ||||||||||| ||||| ||||| ||||| ||||||| Sbjct 839144 CCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATA-ACCTTCAAT 839202 Query 13282 TGCTGCAAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACT---CTCTATCCACT 13337 || || || || | ||| || || | || | || || ||| || ||||| Sbjct 839203 GGCAGCGAAAGCAACCAATCTCTC----TGCGAAGATAGATTCACTGTCCTGAATCCATC 839258 Query 13338 TTCTGGCCCAGTTTGCTTTTTGTTTAA-CGCAGTTCATATTTTCTATTGCGTTAAATAAA 13396 | | ||||| | || || | ||||| | || || ||||| || || || ||||| Sbjct 839259 TGATAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCAATCGCATTGAATAAG 839317 Query 13397 TAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAA 13456 ||| ||||||| || ||||||||||| || || | | ||| | ||||| Sbjct 839318 AAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAG 839377 Query 13457 TGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACT 13516 ||||| ||||||||| |||||||||||||| |||||| |||| |||| | || ||| Sbjct 839378 TGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACT 839437 Query 13517 TC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaa 13575 || | | | |||| | || |||| || || || ||||| || ||| |||||||| || Sbjct 839438 TCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAA 839496 Query 13576 aGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-AC--TTTAACCAATCTGG 13632 || | | | || || | ||||||| || || || || |||||| | Sbjct 839497 GGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATG 839556 Query 13633 AAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692 || ||| || |||| ||| | ||| || | ||||| || ||||| | || ||||||| Sbjct 839557 AATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATA 839616 Query 13693 C 13693 | Sbjct 839617 C 839617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982357979216