Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5 201 3e-46 seq7 152 1e-31 seq6 120 7e-22 seq2 120 7e-22 >seq5 Length=1086982 Score = 201 bits (222), Expect = 3e-46 Identities = 306/430 (71%), Gaps = 7/430 (2%) Strand=Plus/Minus Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935 ||||||||| || || || ||| |||| ||||| ||| || ||| || || ||||| || Sbjct 839482 TGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCAGAAGTGCAAATTCCAGA 839423 Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995 ||| | |||||| || || ||||| || || ||||| ||||| ||||||| || Sbjct 839422 AGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATTC 839363 Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACT-ATTTTCTTCTA 269054 || ||||| ||||||||||| | ||| ||| | |||| | || ||| | | | Sbjct 839362 CCTGTTAATTGATACTTATATCAAGGATC-CAAAGGAAAGCGATTTCTTATTCAATGCGA 839304 Query 269055 T-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT 269113 | || ||| | | | | | | | || | ||||||||| | | |||||| | || Sbjct 839303 TTGAAAACATTCCTCAGATTAA-AGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGAC 839245 Query 269114 AGCGCGCCT---TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTT 269170 || | || | || ||| || || |||||||| || || | |||||| |||||| Sbjct 839244 AGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGTTATTTCTTT 839185 Query 269171 TCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACT 269230 || || || ||||| |||||||| ||||||||||| | ||| || |||||||| |||| Sbjct 839184 TCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACG 839125 Query 269231 TTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTA 269290 || |||||||||||||| |||| || ||||||||||| ||| || || ||| || || Sbjct 839124 TTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATGTCTACTA 839065 Query 269291 TTTACTAATT 269300 ||| || ||| Sbjct 839064 TTTGCTCATT 839055 >seq7 Length=946563 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| || |||||||| ||||| || || || || ||||||||||| || |||||| Sbjct 343620 ACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 343561 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || || || || || | ||||| |||||||| || || || || ||||| ||| Sbjct 343560 AGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGA 343501 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||| || | |||||| || ||| || |||| || ||||||||| Sbjct 343500 ATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGTCTTA 343441 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || ||||| |||||||| Sbjct 343440 CCGGTTAAAGTCTTGACAAAAATCTGCAT 343412 >seq6 Length=1070623 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || || || | || || || ||||| || || || || |||||||| Sbjct 959800 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 959741 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||| | ||| || |||||||| || | || ||||| ||||| || Sbjct 959740 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 959681 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || || || || || || ||||| | || ||||| || | || || || ||| || Sbjct 959680 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 959621 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || | |||||||||||||| || | || || || || || ||||| ||| Sbjct 959620 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTTG 959570 >seq2 Length=1354397 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || || || | |||| || ||||| || || || || ||||| Sbjct 395819 ATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCG 395760 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||||||||||||||| | ||| || |||||||| || | || ||||| ||||| Sbjct 395759 GACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 395700 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || |||||||||| || ||||| || | || || || ||| Sbjct 395699 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 395640 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 || || | || || ||||||||||| Sbjct 395639 ACTTCCAAAGTGATGGTCTTACCAGT 395614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398281981664