Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 1e-29
seq4 129 9e-26
>seq7
Length=946563
Score = 141 bits (156), Expect = 1e-29
Identities = 193/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||| | | |||| ||| |||||||||| ||||| |||||||||||||||||
Sbjct 444943 GCCAAGCGTCATAGAAAGATC-CTTAGAGATAACATTCAAGGTATCACCAAGCCAGCTAT 445001
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| |
Sbjct 445002 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 445061
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | | ||| ||||||| ||| | | | ||||| |||||| || || || ||
Sbjct 445062 TAGAGCTGTCTTGAAGACTTTCTTGGAATCTGTTATTAGAGATGCTGTCACTTACACAGA 445121
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | ||||||||||| || | ||| | || ||||| ||||| | |||||
Sbjct 445122 ACACGCTAAGAGAAAGACTGTCACTTCTCTTGATGTTGTGTATGCTTTGAAGAGACAAGG 445181
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
| | | |||||||| || ||||
Sbjct 445182 TAGAACCTTGTATGGTTTCGGTGGTTA 445208
>seq4
Length=1218070
Score = 129 bits (142), Expect = 9e-26
Identities = 191/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||| |||||||||| ||||| ||||| |||||||||||
Sbjct 785689 GCCAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 785631
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| |
Sbjct 785630 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 785571
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | |||| | |||| ||||| || |||| ||| |||||| | || || ||
Sbjct 785570 CAGAGCTGTTCTAAAGACTTTCCTTGAGTCCGTCATCAGAGATGCTGTTACTTACACGGA 785511
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | ||||| || || || ||||| | |||||||| ||||| | |||||
Sbjct 785510 ACACGCCAAGAGAAAGACCGTTACTTCTTTGGATGTTGTCTATGCCTTGAAGAGACAAGG 785451
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 785450 TAGAACCTTGTATGGTTTCGGTGGTTAA 785423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075192685544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |