Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq5 161 1e-34
>seq5
Length=1086982
Score = 161 bits (178), Expect = 1e-34
Identities = 560/870 (64%), Gaps = 11/870 (1%)
Strand=Plus/Plus
Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259
||||| |||||||||||||| ||||| || ||| || || ||||| |||||||||
Sbjct 838796 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 838855
Query 21260 GGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTAC 21318
|| || ||| || ||| |||| || || | | | || |||||| || ||
Sbjct 838856 GGGTTAGTCACGTTGAAAAATTTC-TTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGAC 838914
Query 21319 AAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGC 21378
|| || | || || ||| | || |||||||| | || || || |||||
Sbjct 838915 GAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGC 838974
Query 21379 TTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGA 21438
| | || | ||||| || |||||||||| ||| || ||| || | ||
Sbjct 838975 ATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGA 839034
Query 21439 TGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACC 21498
| | || || | || || ||| | | |||||||||||| ||| |||||
Sbjct 839035 AGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAACC 839094
Query 21499 TTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTT 21558
|||||| || | || ||||| |||||||| |||| ||| ||||||| ||| |||| ||
Sbjct 839095 TTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCTT 839154
Query 21559 TAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618
||||| || || | ||||| | |||||||||||| || |||| |||||| || ||
Sbjct 839155 CAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAACCTTCAATGGCAGCGAAAGC 839214
Query 21619 AACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGC 21678
||| |||| || || | ||||||| | ||| |||||| | ||||||| ||
Sbjct 839215 AACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGGC 839274
Query 21679 CTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCATCTA 21737
||| |||||||| | ||| | ||||| || || || |||| || |||| | |
Sbjct 839275 CTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGA-AATCGCTTTCCTTTG 839333
Query 21738 CATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCG 21797
||| | || ||| | || || || || ||||| |||
Sbjct 839334 GATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCA 839393
Query 21798 CTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGT 21856
|| || || || || |||||| | || |||| | ||| || || | | | ||||
Sbjct 839394 TGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAAT-TC 839452
Query 21857 TGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTT 21916
| | | || || ||||||||||| |||||| ||| ||||| || ||||| | |
Sbjct 839453 TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGAG 839512
Query 21917 ATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCAATCTAATAAATCTTTTGATAA 21972
|| ||| ||| |||||| || || || || |||||||| | ||| || ||||
Sbjct 839513 ATGAAAAATCTTTCGTTCTC-ATTCATACGGTTATTCCAATCATGAATATCCTTCGATAG 839571
Query 21973 ATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATC 22032
||| | ||||| | ||||| || ||| || | |||||| ||| || ||
Sbjct 839572 ATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTC 839631
Query 22033 ATTATATATTATTGGAAATATTACAAACCT 22062
|| ||| | ||||| |||| ||||| ||
Sbjct 839632 ATGGTATTTGATTGGGAATAGAACAAATCT 839661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900746809920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |