Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 161 1e-34 >seq5 Length=1086982 Score = 161 bits (178), Expect = 1e-34 Identities = 560/870 (64%), Gaps = 11/870 (1%) Strand=Plus/Plus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| |||||||||||||| ||||| || ||| || || ||||| ||||||||| Sbjct 838796 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 838855 Query 21260 GGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTAC 21318 || || ||| || ||| |||| || || | | | || |||||| || || Sbjct 838856 GGGTTAGTCACGTTGAAAAATTTC-TTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGAC 838914 Query 21319 AAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGC 21378 || || | || || ||| | || |||||||| | || || || ||||| Sbjct 838915 GAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGC 838974 Query 21379 TTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGA 21438 | | || | ||||| || |||||||||| ||| || ||| || | || Sbjct 838975 ATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGA 839034 Query 21439 TGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACC 21498 | | || || | || || ||| | | |||||||||||| ||| ||||| Sbjct 839035 AGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAACC 839094 Query 21499 TTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTT 21558 |||||| || | || ||||| |||||||| |||| ||| ||||||| ||| |||| || Sbjct 839095 TTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCTT 839154 Query 21559 TAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618 ||||| || || | ||||| | |||||||||||| || |||| |||||| || || Sbjct 839155 CAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAACCTTCAATGGCAGCGAAAGC 839214 Query 21619 AACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGC 21678 ||| |||| || || | ||||||| | ||| |||||| | ||||||| || Sbjct 839215 AACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGGC 839274 Query 21679 CTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCATCTA 21737 ||| |||||||| | ||| | ||||| || || || |||| || |||| | | Sbjct 839275 CTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGA-AATCGCTTTCCTTTG 839333 Query 21738 CATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCG 21797 ||| | || ||| | || || || || ||||| ||| Sbjct 839334 GATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCA 839393 Query 21798 CTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGT 21856 || || || || || |||||| | || |||| | ||| || || | | | |||| Sbjct 839394 TGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAAT-TC 839452 Query 21857 TGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTT 21916 | | | || || ||||||||||| |||||| ||| ||||| || ||||| | | Sbjct 839453 TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGAG 839512 Query 21917 ATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCAATCTAATAAATCTTTTGATAA 21972 || ||| ||| |||||| || || || || |||||||| | ||| || |||| Sbjct 839513 ATGAAAAATCTTTCGTTCTC-ATTCATACGGTTATTCCAATCATGAATATCCTTCGATAG 839571 Query 21973 ATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATC 22032 ||| | ||||| | ||||| || ||| || | |||||| ||| || || Sbjct 839572 ATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTC 839631 Query 22033 ATTATATATTATTGGAAATATTACAAACCT 22062 || ||| | ||||| |||| ||||| || Sbjct 839632 ATGGTATTTGATTGGGAATAGAACAAATCT 839661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900746809920