Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 237 4e-57 seq5 147 6e-30 seq1 125 2e-23 >seq8 Length=833973 Score = 237 bits (262), Expect = 4e-57 Identities = 1080/1688 (64%), Gaps = 46/1688 (3%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 || |||||||| | | |||||| || || |||||| | ||| | |||||| ||||||| Sbjct 326383 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 326324 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-T 363547 ||| | || | || | || ||||| || ||||| || | || || | | || | Sbjct 326323 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGAT--GTCCTTGAGATACT 326266 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 ||| || || | ||||| | | ||||||||| |||| || ||||||||||| | Sbjct 326265 TCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCAT 326206 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 | || || | |||||||| || |||||||||||||| | || || | ||| | | Sbjct 326205 GTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAAT 326146 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-A 363726 ||||| | ||||| |||| || || || |||||| | || ||||| ||||| | | Sbjct 326145 GTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTA 326086 Query 363727 C-AGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784 | | || || ||| || || || ||| ||||| ||| || | |||||| | | Sbjct 326085 CGGGTTCA--TATATTGCAGGTACTAACGG-TACTTCGAACGGGTTGATCCCCATGGTAC 326029 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG-AGGAAAGCGCAAAGGGGCG 363843 |||| || |||| ||||| | || || || || ||||| | ||| || ||| || Sbjct 326028 GTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGC-CAGGTGCT 325970 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA- 363902 || ||| |||| | || || || || || || ||||| || | || ||||||| Sbjct 325969 TTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAG 325910 Query 363903 AAACACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960 || ||||| || ||||| ||| |||||| | ||| ||||| || || ||| || | Sbjct 325909 AACCACGGTAAGGAAGAG--ATT-CGTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCA 325853 Query 363961 GACCATTTTATGAAGCGCGT---GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 || || ||||| || || ||| ||| ||| ||| | | || | ||| Sbjct 325852 GATTTGTTCATGAAACGTGTTCAAGAGAATGGT--GAA-TGGACTTTGTTCTCTCCAAGT 325796 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 ||| ||||||| | || ||||| | ||||| || | || || | || ||| || Sbjct 325795 GAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTGTATGAACGTTAC 325736 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | | || || | | | ||||| || || || || || |||| || ||| || Sbjct 325735 GTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGCTATCTTG 325676 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || || || | ||||| || || || | ||| | ||||||||| | || || ||| Sbjct 325675 GAATCTCAAACAGAGACTGGTACTCCATTCATGCTTTACAAAGATGCCTGTAATATAAAG 325616 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257 |||||| || || | ||||| ||| | ||| | ||| || || |||| Sbjct 325615 AGCAACCAAAAGAACTTGGGTACCATTAAATCCTCTAACTTGTGTTGTGAAATCGTTGAG 325556 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 ||| | || || || ||||||||||| |||||| | || || ||||| | || ||| | Sbjct 325555 TACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACCATCGTGT 325496 Query 364318 GTAAAAGATGGTACTTTTG------ACCACCAGCATCTTTATG--ACGTAACCTATCA-T 364368 | ||| || | | || ||| | || || || | || | || | | Sbjct 325495 ATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCATAAAATT 325436 Query 364369 GC---------TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCT 364419 || ||| | || | ||||||| ||||| || || || ||| ||||| Sbjct 325435 GCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCCAGTTCCT 325376 Query 364420 GAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCT 364479 ||||| ||||||||| | | | || || | ||| ||||| | || | ||| Sbjct 325375 GAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGGTTTGGCT 325316 Query 364480 GACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAG 364539 ||||| ||||||||| | | ||||||| || | || || | |||||| | Sbjct 325315 GACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCTAAACATC 325256 Query 364540 GAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACC 364599 | ||||| ||||| || || || | || || || ||||| ||||| || | Sbjct 325255 CAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGCGAAGAAG 325196 Query 364600 AAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGAT 364659 | ||| ||||| |||||||| || || || | || || || | || |||| ||| Sbjct 325195 GATGGACCTTACTCCACTTATGAAGGTTCTCCAATCTCTCAAGGTATTTTGCAGTACGAT 325136 Query 364660 CTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG 364719 || ||||| || ||||| | | |||| | ||||| || | | | | ||| Sbjct 325135 CTGTGGAACACCAAACCATCGGATCTATGGGATTGGGACACTTTGAAGAAAAGCATCAAG 325076 Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 | ||||| | | ||||| | | || || ||||| || || || ||| | ||| Sbjct 325075 GAATATGGTGTTAGAAACTCTTTGCTATTGGCCCCAATGCCAACTGCGTCGACTTCCCAG 325016 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || || || |||||||||| ||||| || | || |||| | || || || || || Sbjct 325015 ATTCTAGGTTACAACGAGTGTTTCGAGCCATACACTTCCAATATGTACTCTCGTCGTGTG 324956 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 | ||||| ||||| | | || || ||| | | ||| | ||||| || Sbjct 324955 TTATCCGGTGAATTCCAAATTGTCAACCCTTACTTGCTACGTGATTTGGTCGACCTAGGT 324896 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 | |||| ||| || |||||| | | |||||| | | |||||| || | || || | Sbjct 324895 ATCTGGGATGATAGTATGAAGCAACACATCATCACTGATAATGGCTCCATCCAAAATCTA 324836 Query 364960 CCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG 365018 || | || |||| |||| || ||| | | ||||| || || |||||||| || Sbjct 324835 CC-GAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTTTGGGAAATCTCTCAAAA 324777 Query 365019 AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAA 365078 |||| |||| || ||||| || ||||| | || || ||| |||| ||| || || || Sbjct 324776 AACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGATCAGTCCCAATCATTGAA 324717 Query 365079 CGTATTCA 365086 | ||||| Sbjct 324716 C--ATTCA 324711 >seq5 Length=1086982 Score = 147 bits (162), Expect = 6e-30 Identities = 304/443 (69%), Gaps = 17/443 (4%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTT---TGCA 22275 || ||||||||| || | || |||||||| ||||||| |||| ||||| |||| Sbjct 839499 GCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA 839440 Query 22276 TCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAAT 22335 ||| | ||| ||||| || | ||||||||||||| | ||||| ||||| ||||| Sbjct 839439 ---GAAGTGCAAATTCCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAAC 839383 Query 22336 GTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAAC 22393 ||||| | || || ||||| || | | | ||| || | ||| | | ||| Sbjct 839382 ATTCACTCAGAGACCTATTCCCTGTTAATTGAT--ACTTATATCAAGGATCCAAAGGAA- 839326 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451 | ||| ||||||| |||||| | ||||| ||| ||||| | ||||| || || Sbjct 839325 AGCGATTTCTTATTCAATGCGATTGAAAACATTCC-TCAGATTAAAGAGAAGGCCGAATG 839267 Query 22452 GGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| | | |||||| | ||| |||| | ||||| || | | |||| || || Sbjct 839266 GGCTATCAGATGGATTCAGGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGC 839207 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || ||||||| ||||||||| || | ||| ||| ||||| ||| | || || Sbjct 839206 TGCCATTGAAGGTTATTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAA 839147 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| |||||||||||||| || || || || || ||||||| ||| | || Sbjct 839146 AGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 839087 Query 22629 TACCGATTTTGCGTGTATGCTAT 22651 |||||||||||| ||| | |||| Sbjct 839086 TACCGATTTTGCATGTCTACTAT 839064 >seq1 Length=1418021 Score = 125 bits (138), Expect = 2e-23 Identities = 350/534 (66%), Gaps = 10/534 (2%) Strand=Plus/Minus Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 ||||||| |||||||| || || | || ||||| || || || || |||||||| | Sbjct 984331 TGGTTCCAATGCTTCGCGTTTTCAATAACACTGCAAGATATGTAGATCAGGGTGGCAACA 984272 Query 363830 AGCGCAAAGGGGCGT-TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888 || | || || | |||| || ||||||||||| ||||| || || |||| ||| Sbjct 984271 AGAGGCCCGGAGCTTATTGC-ATATATCTCGAGCCATGGCATGCGGACATCCTTGATTTT 984213 Query 363889 CTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948 || |||| || || ||| || ||||| ||| || | || | |||||||| | ||| Sbjct 984212 CTACAGCTTCGAAAGAACCACGGTAAAGAAGAAATGAGAGCCAGAGATCTGTTTTTTGCG 984153 Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008 || ||| | |||||| || |||| ||| || ||| | | |||||| | ||| Sbjct 984152 CTGTGGATACCTGACCTGTTCATGAGGCGGGTCGAGTCCAATGGCGATTGGTGTTTGTTT 984093 Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATAC 364068 | ||| | || || || || | |||||| | || | || | || || |||| Sbjct 984092 AGTCCAGATGAGGCCCCTGGACTATGCGATGTGTACGGCAAAGAATTTGATGACTTATAT 984033 Query 364069 GAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTT 364128 || | |||||| || | || | ||| || || || || ||||||| | Sbjct 984032 GAGCATTATGAAACGAATGGTTTACCAATGAAGCGGATCAAGGCTCAAAAACTATGGTCT 983973 Query 364129 GCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC 364188 | || | | || |||||||||||| || | |||||||||||||| || ||| Sbjct 983972 GAGATTTTACAAAGTCAAATTGAGACAGGAGGTCCTTTCATGTTGTACAAAGACTCTTGC 983913 Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC----AACCTATGTAC 364244 || || || |||||| || | | || || || |||| | ||||| ||| Sbjct 983912 AATGAGAAATCAAACCAGAAGAATTTGGGGAC----CATCAGATCGTCAAACCTTTGTTG 983857 Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 ||||||||||| |||| || ||||| || || || ||||||||||| || Sbjct 983856 TGAGATTATTGAGTACAGTTCTAAGGACGAAACAGCTGTCTGTAACCTTGCTTC 983803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256