Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 143 2e-29
seq6 132 4e-26
seq7 93.3 4e-14
>seq2
Length=1354397
Score = 143 bits (158), Expect = 2e-29
Identities = 167/221 (76%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||||||||| ||||| ||||||| | ||||| || || |||||||||||
Sbjct 395599 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 395658
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| |||| | ||| ||||| ||||| || |||||||||||||| |
Sbjct 395659 GA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATCCCACCTGACCAACAAAGA 395715
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | ||| || ||| ||||| || |||
Sbjct 395716 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAA 395775
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| ||||| || || ||||| | ||||| ||
Sbjct 395776 AAGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGG 395816
>seq6
Length=1070623
Score = 132 bits (146), Expect = 4e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||||||||| | || || | ||||| || || |||
Sbjct 959574 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 959633
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||| || || || ||||||||||
Sbjct 959634 GACACTATTGA--CAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACC 959691
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || || ||||| ||||||| | | ||| || || ||||
Sbjct 959692 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACA 959751
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| |||||||| | || || || ||||| | ||||| ||
Sbjct 959752 ACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGG 959800
>seq7
Length=946563
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||||| |||||||| | || || | ||||| || || ||
Sbjct 343412 ATGCAGATTTTTGTCAAGACTTTAACCGGTAAGACTATAACTTTAGAAGTCGAATCTTCC 343471
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || || || |||||||||||||| |
Sbjct 343472 GATACTATTGA--CAATGTCAAGAGTAAGATTCAAGATAAGGAGGGGATTCCACCTGATC 343529
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 343530 AGCAGAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 343589
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || || || ||||| ||
Sbjct 343590 ACATCCAGAAGGAATCTAC 343608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327957750520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |