Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 224 1e-53 >seq5 Length=1086982 Score = 224 bits (248), Expect = 1e-53 Identities = 409/591 (69%), Gaps = 11/591 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| ||||||||||||||||| |||| | ||||| || || || |||| | Sbjct 839072 CATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGA 839131 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa-aaa 93210 ||||| | || ||| ||||| | ||| || || | |||||| ||| ||||| ||| Sbjct 839132 CCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAA 839191 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 || |||||| | ||| || || || || | | || || || | | | | |||| Sbjct 839192 TA-ACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAG---ATTCACTGTC 839247 Query 93269 CTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||| ||||| | | |||||| ||||| || | ||||| ||| | |||| || || Sbjct 839248 CTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGC 839307 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || |||| | |||| | || | | ||| || || ||||| |||||||| ||||| Sbjct 839308 ATTGAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATA 839367 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || || | || ||||| |||||||| || ||||||||| ||||||| | Sbjct 839368 GGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGG 839427 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 || ||||||||| | || |||| || | ||| ||||| ||||||||||| || || Sbjct 839428 AATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGC 839487 Query 93508 TGCaaaaaaaGCCAATATATGCTTTAT--AAAATGTTTC-TCATCATCTTTAAGCTTATC 93564 ||||| || ||||| | | | || ||||| |||| | |||| || | |||| Sbjct 839488 AGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATT 839547 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 |||||| | ||| || || ||||| | |||||| | ||||| ||||| || ||||| Sbjct 839548 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 839607 Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | | || ||| | ||| || || || |||| ||||| |||| ||||| Sbjct 839608 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAA 839658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860744313920