Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7 149 5e-31 seq6 120 3e-22 seq2 118 9e-22 seq5 102 7e-17 >seq7 Length=946563 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| |||||||| || |||||||||||||| || | ||| | ||||| ||| | | Sbjct 343411 GATGCAGATTTTTGTCAAGACTTTAACCGGTAAGACTATAACTTTAGAAGTCGAATCTTC 343470 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | ||| || |||| || |||||||| |||||||| |||||||| ||||| Sbjct 343471 CGATACTATTGACAATGTCAAGAGTAAGATTCAAGATAAGGAGGGGATTCCACCTGATCA 343530 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || || || || || || |||| ||| | || | ||||||||||| Sbjct 343531 GCAGAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAA 343590 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTT 22447 ||| || || ||||| ||| | ||| | |||||| ||||||| || |||| Sbjct 343591 CATCCAGAAGGAATCTACCTTGCATCTGGTTTTGAGATTGCGTGGTGGTT 343640 >seq6 Length=1070623 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || ||||| |||||||| || | || | ||||| ||| | Sbjct 959571 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 959630 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || || ||||||||||||||||| ||||| || Sbjct 959631 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 959690 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || ||| | || | || || ||| Sbjct 959691 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 959750 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| |||||||| | || || || | ||||| | || ||| Sbjct 959751 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGT 959801 >seq2 Length=1354397 Score = 118 bits (130), Expect = 9e-22 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || ||||| || ||||| || ||||| | ||||| ||| | | || || | Sbjct 395598 TTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 395657 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| ||| |||||||||||||| ||||| ||||| || |||||| | | Sbjct 395658 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 395717 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || || || || | || | ||||| |||||||| ||||| Sbjct 395718 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAA 395777 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| |||| || ||| | ||||| | || ||| Sbjct 395778 GGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGGT 395817 >seq5 Length=1086982 Score = 102 bits (112), Expect = 7e-17 Identities = 111/146 (76%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 117069 GCTTTCGC---CATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTT 117125 |||||||| ||||| |||| |||||||||||| |||||||| || || | Sbjct 839214 GCTTTCGCTGCCATTG---AAGGTTATTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGG 839158 Query 117126 ATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGAC 117185 | |||| |||||||||||||| |||||||||||| |||||||| || | | || Sbjct 839157 TTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGAT 839098 Query 117186 GAAGGTTTACACACCGATTTTGCGTG 117211 ||||||||||| ||||||||||| || Sbjct 839097 GAAGGTTTACATACCGATTTTGCATG 839072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727959076520