Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 181 2e-40 seq6 161 2e-34 seq7 141 2e-28 >seq2 Length=1354397 Score = 181 bits (200), Expect = 2e-40 Identities = 160/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||||||| ||||| || ||||||||||| || ||||| | || || || ||||| Sbjct 395798 ACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCC 395739 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || | |||||||||||| ||||| || ||||||||||||||| Sbjct 395738 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGA 395679 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| |||||| || || ||||| | ||||| |||||||| |||||||| || Sbjct 395678 ATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 395619 Query 68433 CCCGTGAGGGTCTTGACGAA 68452 || || | ||||||||||| Sbjct 395618 CCAGTCAAAGTCTTGACGAA 395599 >seq6 Length=1070623 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || ||||||||||| || || || | || || |||||||| Sbjct 959782 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 959723 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || | |||||||||||| ||||| || || ||||||||||| Sbjct 959722 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGG 959663 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| || || ||||| | ||||| ||||||||||| || || || Sbjct 959662 ATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTA 959603 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||||||||| || ||||| Sbjct 959602 CCGGTCAAAGTCTTGACGAAAATTTGCAT 959574 >seq7 Length=946563 Score = 141 bits (156), Expect = 2e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| || | || || || || |||||||| |||||||| || || || ||||| Sbjct 343624 CAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 343565 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| || ||||| || | ||| || || || |||||||| || ||||| || Sbjct 343564 TTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATC 343505 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| |||||| || || || || | ||||| ||||| || || || || Sbjct 343504 TTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGT 343445 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471 || || || | |||||||| || |||||||| |||| ||| Sbjct 343444 CTTACCGGTTAAAGTCTTGACAAAAATCTGCATCCTGCTCTTA 343402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622307837760