Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 181 2e-40
seq6 161 2e-34
seq7 141 2e-28
>seq2
Length=1354397
Score = 181 bits (200), Expect = 2e-40
Identities = 160/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||||||||| ||||| || ||||||||||| || ||||| | || || || |||||
Sbjct 395798 ACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCC 395739
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || | |||||||||||| ||||| || |||||||||||||||
Sbjct 395738 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGA 395679
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||||| |||||| || || ||||| | ||||| |||||||| |||||||| ||
Sbjct 395678 ATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 395619
Query 68433 CCCGTGAGGGTCTTGACGAA 68452
|| || | |||||||||||
Sbjct 395618 CCAGTCAAAGTCTTGACGAA 395599
>seq6
Length=1070623
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | ||||| || ||||||||||| || || || | || || ||||||||
Sbjct 959782 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 959723
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || | |||||||||||| ||||| || || |||||||||||
Sbjct 959722 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGG 959663
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | |||||| || || ||||| | ||||| ||||||||||| || || ||
Sbjct 959662 ATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTA 959603
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||||||||||| || |||||
Sbjct 959602 CCGGTCAAAGTCTTGACGAAAATTTGCAT 959574
>seq7
Length=946563
Score = 141 bits (156), Expect = 2e-28
Identities = 165/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||| || | || || || || |||||||| |||||||| || || || |||||
Sbjct 343624 CAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 343565
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| || ||||| || | ||| || || || |||||||| || ||||| ||
Sbjct 343564 TTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATC 343505
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| |||||| || || || || | ||||| ||||| || || || ||
Sbjct 343504 TTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGT 343445
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
|| || || | |||||||| || |||||||| |||| |||
Sbjct 343444 CTTACCGGTTAAAGTCTTGACAAAAATCTGCATCCTGCTCTTA 343402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622307837760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |