Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7 116 9e-21 seq2 100 7e-16 seq6 98.7 2e-15 >seq7 Length=946563 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| | || ||||| | || ||| || ||||| || || |||| Sbjct 343638 CCACCACGCAATCTCAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGAT 343579 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||||| ||| || ||||||||||||| | ||| ||| | ||| Sbjct 343578 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGA 343519 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| || || || || || || || |||| |||| ||||| ||| Sbjct 343518 ATCCCCTCCTTATCTTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACT 343459 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| ||||| | ||||||||| || |||||||| Sbjct 343458 TCTAAAGTTATAGTCTTACCGGTTAAAGTCTTGACAAAAATCTGCAT 343412 >seq2 Length=1354397 Score = 100 bits (110), Expect = 7e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | |||||||| ||||| || || || || Sbjct 395781 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 395722 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | |||||| ||||| || || || || || | || || || Sbjct 395721 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATT 395662 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||||| Sbjct 395661 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGAC 395602 Query 288462 GAA 288464 ||| Sbjct 395601 GAA 395599 >seq6 Length=1070623 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | || ||||| ||||| || || || || Sbjct 959765 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 959706 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | |||||| || || || || ||||| || | || || || Sbjct 959705 GATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGACTTGACATT 959646 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | || || ||||| ||||||| ||||||||| Sbjct 959645 GTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGAC 959586 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 959585 GAAAATTTGCAT 959574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654279085424