Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq7 143 2e-29 seq2 120 2e-22 seq6 113 3e-20 >seq7 Length=946563 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||| | ||| | |||||| || || || |||||||||||| Sbjct 343638 CCACCACGCAATCTCAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGAT 343579 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | ||| || || |||| Sbjct 343578 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGA 343519 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || ||| || || || ||| | || ||||||||| | ||| || Sbjct 343518 ATCCCCTCCTTATCTTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACT 343459 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || || || ||||| || | ||| || |||||||| ||||| Sbjct 343458 TCTAAAGTTATAGTCTTACCGGTTAAAGTCTTGACAAAAATCTGCAT 343412 >seq2 Length=1354397 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||||| ||| || || || || || || ||||| |||||||| ||| Sbjct 395816 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 395757 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| ||||||| ||||| || ||||| | ||||| | |||||||| ||| Sbjct 395756 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 395697 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| || || ||| | || ||||| || | ||| || Sbjct 395696 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 395637 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168 || || || ||||| ||||| |||| ||| || || ||| Sbjct 395636 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 395598 >seq6 Length=1070623 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||||| || || || | || || || ||||| |||||||| || Sbjct 959800 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 959741 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||| Sbjct 959740 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 959681 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || || || ||| | || ||||| || | ||| || Sbjct 959680 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 959621 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || |||||||| || ||||| |||| ||| || || ||||||||||| || Sbjct 959620 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391965154280