Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq7 129 5e-25
seq6 102 7e-17
seq2 91.5 1e-13
>seq7
Length=946563
Score = 129 bits (142), Expect = 5e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || |||||||| ||||| || |||||| | ||| | |
Sbjct 343626 CTCAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCA 343567
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || |||||| | ||||||| ||||| || || ||||| || || |||
Sbjct 343566 TCTTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTA 343507
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | || |||||||| |||||||| | ||| |
Sbjct 343506 TCTTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATA 343447
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || |||||||| ||||||
Sbjct 343446 GTCTTACCGGTTAAAGTCTTGACAAAAATCTGCATC 343411
>seq6
Length=1070623
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || |||||||||||||| || || || | ||| || ||| ||||||||
Sbjct 959776 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGC 959717
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | ||||||| ||| ||||| || || || || || || ||||| || ||
Sbjct 959716 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTA 959657
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| || | ||||| ||||| |||||||| | |||| || || |||||
Sbjct 959656 GACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTACCGGTC 959597
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
| ||| || || ||||||||||||
Sbjct 959596 AAAGTCTTGACGAAAATTTGCATC 959573
>seq2
Length=1354397
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || |||||||||||||| || || ||| | ||| || || ||||||||
Sbjct 395792 TGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCAATTGC 395733
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | ||||||| ||| ||||| || || || ||||| || |||||||| |||
Sbjct 395732 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT 395673
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| || | ||||| ||||| || ||||| | ||| | || || || ||
Sbjct 395672 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 395613
Query 45318 AGAGTTTTTACAAAA 45332
| ||| || || |||
Sbjct 395612 AAAGTCTTGACGAAA 395598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003154799680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |