Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 257 2e-63
seq8 194 2e-44
seq1 113 5e-20
>seq5
Length=1086982
Score = 257 bits (284), Expect = 2e-63
Identities = 599/893 (67%), Gaps = 33/893 (4%)
Strand=Plus/Plus
Query 18685 ACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCCATAAAATCAAAT 18744
||||| ||||| || ||||| || || || | | || || ||||| |||||||||
Sbjct 838796 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 838855
Query 18745 GGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCTACA 18804
|| || | || || | | ||| ||| || || | | ||||||||||| || ||
Sbjct 838856 GGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGACG 838915
Query 18805 AATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAACAGGTAGTGCA 18864
|| | || || |||||||| || ||||| || | ||| ||| ||||| |||
Sbjct 838916 AACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGCA 838975
Query 18865 TCTGT-AAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATACAACTCT--- 18920
|| | ||| | |||| ||| || | || || || | ||||| | | | |
Sbjct 838976 TCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGA 839034
Query 18921 ---ATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATG 18977
|||| ||| | | || ||| ||| | | |||||||||||| |||
Sbjct 839035 AGGATCTGGCTTAT-----TCTTCAA-ATGAGCAAATAGTAGACATGCAAAATCGGTATG 839088
Query 18978 TAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCt 19037
|| || || ||||| | |||||||| |||||||| |||| ||| ||||| || ||| |
Sbjct 839089 TAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTT 839148
Query 19038 tttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGC 19097
|| || |||||||| |||| |||||| || || |||||||| |||||| | || ||
Sbjct 839149 CTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAACCTTCAATGGCAGC 839208
Query 19098 AAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCA 19157
|||||||| | ||| ||| | | ||| ||| | | ||||||||| | | |||||
Sbjct 839209 GAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCA 839268
Query 19158 ATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGC-- 19215
|| ||||||| ||| | || || | || || | ||| |||| | | || |||
Sbjct 839269 TTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATA-AGAAAT-CGCTT 839326
Query 19216 TCATCTGTATCTTTAACATATGCATCTATCAATAAACTG----TACATTTCTGAATGAAT 19271
|| | || ||| || | ||| | ||||||| ||| | || | ||||| |||||
Sbjct 839327 TCCTTTGGATCCTTGATATAAG----TATCAATTAACAGGGAATAGGTCTCTGAGTGAAT 839382
Query 19272 ATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACT 19331
||||| || || || || || || |||||| | ||||||| || || |||||
Sbjct 839383 GTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGC 839442
Query 19332 ACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAA 19391
|| || | || || ||||| ||||| ||||| |||||| || ||||| || || ||
Sbjct 839443 ACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAA 839502
Query 19392 TACATGTTTAATAAAATGTTTTTC-ATCTGAGGTTAAT----GTATTCCAATCATTAATA 19446
||| | || ||| | |||| ||| | || || |||||||||||| ||||
Sbjct 839503 GACACGGGAGATGAAAAATCTTTCGTTCTCA--TTCATACGGTTATTCCAATCATGAATA 839560
Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506
|| || |||| ||| | ||||| | ||||| || |||||||||||| | ||||||
Sbjct 839561 TCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCT 839620
Query 19507 TTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559
| ||| || ||| | |||| || || |||| |||||||||| ||| || ||
Sbjct 839621 TGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTACGTTTGTTCTC 839673
>seq8
Length=833973
Score = 194 bits (214), Expect = 2e-44
Identities = 730/1133 (64%), Gaps = 39/1133 (3%)
Strand=Plus/Plus
Query 47956 ATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015
|||| || |||||||| || | || || | | ||||| || || ||||||||||
Sbjct 325585 ATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCA 325644
Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT--AGC 48073
| || || || ||||| ||| | |||||||| | ||||| | ||| |||| | |||
Sbjct 325645 TGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCA--CAGTTTTTGAGC 325702
Query 48074 CTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTC 48133
|| ||| |||| | | ||| |||| ||| || ||||||||
Sbjct 325703 TTTGATAGTCTTTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTC 325762
Query 48134 ATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTC 48193
||| ||||| |||| | || || ||| |||| | ||| | | ||| | ||| || |
Sbjct 325763 ATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACC 325822
Query 48194 ATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCT 48253
|| | || || | |||| || | |||||| ||||| || ||| || ||||| ||
Sbjct 325823 ATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCT 325882
Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313
| | | ||||| || || ||| | | || | || || | || || ||
Sbjct 325883 TGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGC 325942
Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373
||||||||||| || || | || | ||||||| | ||| ||||| |||||||| |
Sbjct 325943 GTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCAC 326002
Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433
||| | ||||| ||||| | || | || ||| |||| | || || || |||| ||
Sbjct 326003 ATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTT 326062
Query 48434 GGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCAC 48492
|| || | |||||| || ||| | || || || || || ||| |||||||
Sbjct 326063 AGTACCTGCAATATATGAACCCGTAGAACGAATGTTGTGTATGTGCAA-ACCAATACCAC 326121
Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552
| || | ||||| || | |||||| || | ||||| ||||| || || || |
Sbjct 326122 CAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGT 326181
Query 48553 CATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAA 48612
|||| |||| | ||| ||||| |||||| || || | ||| || | ||| |
Sbjct 326182 CATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGA 326241
Query 48613 ATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAA 48672
| | |||||||| |||||||| || || || || | || ||||| || ||||||
Sbjct 326242 AAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAG 326301
Query 48673 CAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTC 48732
|||| || || || ||| ||||| | || || | ||| | ||||| |||||| |
Sbjct 326302 CAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGAC 326361
Query 48733 TTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAA 48792
|||| | | || |||||| ||| ||||| || |||| ||||| || ||||
Sbjct 326362 GTTCAGCGACTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAA 326421
Query 48793 AATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATG 48850
||||||| | ||||| || |||||| || ||| | || || | ||||||||
Sbjct 326422 AATAGTTAAAGTTGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATG 326479
Query 48851 TTTATATACTACATCCATTACATTTTTTGATATAAT-------TGA------TTCCTT-- 48895
||| | || | ||||| || | || || || || ||| ||| ||
Sbjct 326480 TTTGTTGACGATGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGG 326539
Query 48896 GTAAAGAT-CTTCTACAA--CA-TCACTA------AATAtttttt--ttGTTTCTTTATG 48943
|| | || || |||| || |||| | || | | ||| | || | || ||
Sbjct 326540 GTTCACATAGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTG 326599
Query 48944 AAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACA 49003
| |||||| |||| ||||||||| || || |||||||||| ||||| | || || ||
Sbjct 326600 CAAATTAGAGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGT-CA 326658
Query 49004 TGTAC-TAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCT 49055
| ||| | | |||| || || || | || ||||| |||||| ||||||
Sbjct 326659 TATACGCACAAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCT 326711
>seq1
Length=1418021
Score = 113 bits (124), Expect = 5e-20
Identities = 406/630 (64%), Gaps = 10/630 (2%)
Strand=Plus/Plus
Query 48116 ATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACA 48175
|||||| | |||||||| | || ||||||| || ||||| |||| ||||
Sbjct 984033 ATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGGCCTCATCTGGACT 984092
Query 48176 CATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAG 48235
| ||| ||||||| ||| | || | |||| || | || |||||||| ||
Sbjct 984093 AAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGTCAGGTATCCACAG 984152
Query 48236 AGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAG 48295
|| | ||| | ||| || | ||| | |||||| || || ||| || ||| | ||
Sbjct 984153 CGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAG 984212
Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA-CACCTGGTCGTT 48354
||| || | || || ||||||||||| || | ||||| ||| || | | || || | |
Sbjct 984213 AAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATA-TGCAATAAGCTCCGGGCCTCT 984271
Query 48355 TATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAA 48414
| || || || ||||||| |||||| ||||| || || |||| | | |||||| || |
Sbjct 984272 TGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCA 984331
Query 48415 TACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA 48474
|| | || | ||||||| | || || ||| ||| | | ||| || || ||
Sbjct 984332 AGCCGCTCGACACACCATTGCTACCTGATATAAGCGCCCCATTTGATCTAATGTTGGAAA 984391
Query 48475 TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCAT 48534
|| || |||||||||| ||| || || | || | | ||| || |
Sbjct 984392 CATGAAGGCCAATACCACCTGAAGCTTTGGAAATCATGGCTGTCTTGTGAAGTGTCTTGA 984451
Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGC-GGA 48593
|||| || |||||| || |||||||| | |||||||| |||| | | ||
Sbjct 984452 AAATACCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATGACGACAAGTACTGGT 984511
Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653
| || || |||| ||| ||||| || || || |||||||| || | || ||| |
Sbjct 984512 TCAC-TGTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAAATAGCGCTTTGACATT 984570
Query 48654 AATTTATATGTTTCAATAACAGAATCTATATCCCA------TTGATGTATACCTATAGAT 48707
| || ||| || || | || ||||| |||||| | | ||| || ||| ||
Sbjct 984571 AGTTCATAAGTCTCTACTACTGAATCAATATCCGAATATGGTCCATGAATCGCTAGAGCG 984630
Query 48708 ACACGCATTAACATATATTGAGGTCTTTCA 48737
|| | ||| || | | |||||||| |||||
Sbjct 984631 ACTCTCATGAATAGAAATTGAGGTGTTTCA 984660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108743789120
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