Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq8 140 2e-28
seq1 127 1e-24
>seq8
Length=833973
Score = 140 bits (154), Expect = 2e-28
Identities = 428/656 (65%), Gaps = 17/656 (3%)
Strand=Plus/Plus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| ||| ||| ||| |||| | | ||| | ||| || ||||||||||
Sbjct 325798 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 325857
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||| | || || |||||||| || | || ||||| || ||||| ||||| |
Sbjct 325858 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 325917
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||||| ||||||||| || |||| |||||||||||| || || | ||| ||| ||||
Sbjct 325918 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 325977
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
||||| ||||||||||| || || | ||||| | ||||| || | ||| |
Sbjct 325978 GCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGG 326037
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
| | || || | ||| ||||| || | ||| | || || || || | ||| |
Sbjct 326038 GGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGT 326097
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAAC 26247
||| || | ||| || |||||||| || ||||| ||||| || | |||
Sbjct 326098 TGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAA- 326156
Query 26248 TGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAA 26307
|||||| |||| || | ||| ||| | ||||| | | || ||||| ||||| |
Sbjct 326157 -GTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACAT 326215
Query 26308 TTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC 26367
|| | | | || || | ||| || | || || | ||||||| | | |||| ||
Sbjct 326216 CTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATC--TC 326273
Query 26368 ACTCAAAGCTG--TATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATA 26425
| | | | | ||||||| |||| | | ||||| | || | | || ||| |
Sbjct 326274 AAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACA 326333
Query 26426 GCTGTTCTTAACCACATATATTGAGGTCGTTCA---ATTACATTATTTTCCGCATCTCTA 26482
|| ||| | ||||| |||||| |||||| | | || |||| ||| ||
Sbjct 326334 GCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCATTT-----ATC-CTC 326387
Query 26483 ATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538
| || |||||| || | |||||| || |||||||| | | |||||||||||
Sbjct 326388 AGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGAAATCTCT 326443
>seq1
Length=1418021
Score = 127 bits (140), Expect = 1e-24
Identities = 322/481 (67%), Gaps = 14/481 (3%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|| ||||| || ||| |||||| |||| ||| || | ||| || | || ||
Sbjct 984084 ATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGTCAGG 984143
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
||||||| ||| |||| | |||||| ||||||||||||||||| ||||| ||||||
Sbjct 984144 TATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCG 984203
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAA-AACTAC 26066
|| | || ||||||| || || | |||||||| || | ||| || |||| || |
Sbjct 984204 AAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTC 984262
Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126
| || || ||||| |||||||| ||||||||||| | ||||||||| | ||
Sbjct 984263 CGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCA 984322
Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA--TGA-ATCTTGGATCCTGTCGATC 26183
||||||| || || | || | || | ||||| ||| || | || | ||||
Sbjct 984323 TTGGAACCAAGCCGCTCGACACACCAT---TGCTACCTGATATAAGCGCCCCATTTGATC 984379
Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAA---ATAGCTGCACAAT 26240
|||| | | | |||||| || || ||||| | ||| ||| || |||| |
Sbjct 984380 TAATGTTGGAAACATGAAGGCCAATACCACCTGAAGCTTTGGAAATCATGGCTG--TCTT 984437
Query 26241 CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAG 26300
|| || ||| | |||||| || | ||| || || ||||||| | | |||||| |
Sbjct 984438 GTG-AAGTGTCTTGAAAATACCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATG 984496
Query 26301 AAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAAT 26360
| || || | | | ||| |||| ||| ||||| ||||||| |||||| | |||
Sbjct 984497 ACGACAAGTACTGGTTCACTGTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAAAT 984556
Query 26361 A 26361
|
Sbjct 984557 A 984557
Score = 84.2 bits (92), Expect = 1e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 25013 ATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACAT 25072
||| |||| ||| || |||||||| | ||| ||| ||||| | ||| || || ||
Sbjct 983215 ATATATTCCCCACTTAATACTCTTCTCGTGTATACGTTAGAAGTCATTGGCTCGAACGAT 983274
Query 25073 TCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAA 25132
||| | ||||| || ||||||||||| ||||| ||||||||| ||||| | |||||
Sbjct 983275 TCAGTGTTTCCCAATATTTGAGAAGTGGATGCCGTTGGCATTGGTGCTACCAGAAGCGAG 983334
Query 25133 TTTC 25136
||||
Sbjct 983335 TTTC 983338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039975328600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |