Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq8 140 2e-28 seq1 127 1e-24 >seq8 Length=833973 Score = 140 bits (154), Expect = 2e-28 Identities = 428/656 (65%), Gaps = 17/656 (3%) Strand=Plus/Plus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| ||| ||| ||| |||| | | ||| | ||| || |||||||||| Sbjct 325798 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 325857 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||| | || || |||||||| || | || ||||| || ||||| ||||| | Sbjct 325858 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 325917 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||||| ||||||||| || |||| |||||||||||| || || | ||| ||| |||| Sbjct 325918 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 325977 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 ||||| ||||||||||| || || | ||||| | ||||| || | ||| | Sbjct 325978 GCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGG 326037 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 | | || || | ||| ||||| || | ||| | || || || || | ||| | Sbjct 326038 GGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGT 326097 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAAC 26247 ||| || | ||| || |||||||| || ||||| ||||| || | ||| Sbjct 326098 TGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAA- 326156 Query 26248 TGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAA 26307 |||||| |||| || | ||| ||| | ||||| | | || ||||| ||||| | Sbjct 326157 -GTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACAT 326215 Query 26308 TTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC 26367 || | | | || || | ||| || | || || | ||||||| | | |||| || Sbjct 326216 CTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATC--TC 326273 Query 26368 ACTCAAAGCTG--TATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATA 26425 | | | | | ||||||| |||| | | ||||| | || | | || ||| | Sbjct 326274 AAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACA 326333 Query 26426 GCTGTTCTTAACCACATATATTGAGGTCGTTCA---ATTACATTATTTTCCGCATCTCTA 26482 || ||| | ||||| |||||| |||||| | | || |||| ||| || Sbjct 326334 GCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCATTT-----ATC-CTC 326387 Query 26483 ATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538 | || |||||| || | |||||| || |||||||| | | ||||||||||| Sbjct 326388 AGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGAAATCTCT 326443 >seq1 Length=1418021 Score = 127 bits (140), Expect = 1e-24 Identities = 322/481 (67%), Gaps = 14/481 (3%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 || ||||| || ||| |||||| |||| ||| || | ||| || | || || Sbjct 984084 ATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGTCAGG 984143 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||||| ||| |||| | |||||| ||||||||||||||||| ||||| |||||| Sbjct 984144 TATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCG 984203 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAA-AACTAC 26066 || | || ||||||| || || | |||||||| || | ||| || |||| || | Sbjct 984204 AAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTC 984262 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 | || || ||||| |||||||| ||||||||||| | ||||||||| | || Sbjct 984263 CGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCA 984322 Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA--TGA-ATCTTGGATCCTGTCGATC 26183 ||||||| || || | || | || | ||||| ||| || | || | |||| Sbjct 984323 TTGGAACCAAGCCGCTCGACACACCAT---TGCTACCTGATATAAGCGCCCCATTTGATC 984379 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAA---ATAGCTGCACAAT 26240 |||| | | | |||||| || || ||||| | ||| ||| || |||| | Sbjct 984380 TAATGTTGGAAACATGAAGGCCAATACCACCTGAAGCTTTGGAAATCATGGCTG--TCTT 984437 Query 26241 CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAG 26300 || || ||| | |||||| || | ||| || || ||||||| | | |||||| | Sbjct 984438 GTG-AAGTGTCTTGAAAATACCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATG 984496 Query 26301 AAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAAT 26360 | || || | | | ||| |||| ||| ||||| ||||||| |||||| | ||| Sbjct 984497 ACGACAAGTACTGGTTCACTGTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAAAT 984556 Query 26361 A 26361 | Sbjct 984557 A 984557 Score = 84.2 bits (92), Expect = 1e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 25013 ATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACAT 25072 ||| |||| ||| || |||||||| | ||| ||| ||||| | ||| || || || Sbjct 983215 ATATATTCCCCACTTAATACTCTTCTCGTGTATACGTTAGAAGTCATTGGCTCGAACGAT 983274 Query 25073 TCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAA 25132 ||| | ||||| || ||||||||||| ||||| ||||||||| ||||| | ||||| Sbjct 983275 TCAGTGTTTCCCAATATTTGAGAAGTGGATGCCGTTGGCATTGGTGCTACCAGAAGCGAG 983334 Query 25133 TTTC 25136 |||| Sbjct 983335 TTTC 983338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600