Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq5 212 9e-50
seq6 129 9e-25
seq7 116 5e-21
seq2 107 3e-18
>seq5
Length=1086982
Score = 212 bits (234), Expect = 9e-50
Identities = 553/834 (66%), Gaps = 24/834 (3%)
Strand=Plus/Plus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
||| || | ||| || |||| | || ||||| ||||| ||||| || ||| || ||
Sbjct 838777 AGCCTTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGAT 838836
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT--AATTCG 17977
| ||| ||||||||||| ||||| || || |||| ||||| || ||
Sbjct 838837 GTTCTCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTT--CTTGTTCCCGAAAGCG 838894
Query 17978 TATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCT 18037
| || |||||| || || || || || || || ||||| ||| ||||||||
Sbjct 838895 ACCAGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCC 838954
Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCT 18094
| || |||| ||||||||||| || || | ||||| || ||||| || | ||
Sbjct 838955 AATAAA--GAAACGGGTAGAGCATCGATGAAGTACCTCTTT-TCGATCTCGACGGCTTCA 839011
Query 18095 TTTATTATGTTT---ATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATAT 18151
| || || ||| || | || | |||| ||||| | | ||| | | |
Sbjct 839012 GTAATAATCTTTTCGATAATGGAAGGATCTGGC---TTATTCTTCAAATGAGCAAA---T 839065
Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
| || ||| |||||||| || |||||||||||||||||| | || ||||||||| ||||
Sbjct 839066 AGTAGACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAAC 839125
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|||| || ||||||| |||| | || || | ||| || || | || || || |||
Sbjct 839126 GTTAGACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAA 839185
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331
||||| ||| |||| | ||||| || | ||||| || || || | ||| | ||
Sbjct 839186 AAGAAATAACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTG 839245
Query 18332 CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391
| | |||||| | |||||||| | | || || || | || ||
Sbjct 839246 TCCTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATC 839305
Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451
||||| || || ||| |||| || | ||| || |||||||| || ||||||| |||
Sbjct 839306 GCATTGAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAA 839365
Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511
|| | || || || ||| ||||||| || || |||| ||| || || |||| ||
Sbjct 839366 TAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCT 839425
Query 18512 GGATATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570
||| ||| | || || | |||| | || || ||||||||||| |||||||| ||||
Sbjct 839426 GGAATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGA 839484
Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627
| || || || ||||| ||| |||||| | |||| || || || | | ||
Sbjct 839485 GGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTT 839544
Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGA 18681
||||| |||| ||||| || |||||||||| ||||| | ||||| || ||
Sbjct 839545 ATTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGA 839598
>seq6
Length=1070623
Score = 129 bits (142), Expect = 9e-25
Identities = 170/234 (73%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || ||||| || || |||||||| || ||||||||| |
Sbjct 959571 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 959630
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || ||| || ||||| || || || || || || ||
Sbjct 959631 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 959690
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 959691 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 959750
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || ||||||| ||||| ||||
Sbjct 959751 A--ACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGTG 959802
>seq7
Length=946563
Score = 116 bits (128), Expect = 5e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || || || || || ||||| || |||||||||||| |||
Sbjct 343412 ATGCAGATTTTTGTCAAGACTTTAACCGGTAAGACTATAACTTTAGAAGTCGAATCTTCC 343471
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || | ||| || |||||||| || || || || || || ||
Sbjct 343472 GATACTATTGACAATGTCAAGAGTAAGATTCAAGATAAGGAGGGGATTCCACCTGATCAG 343531
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||| | || |||||||| || |||||| |||||| |||| ||||| ||
Sbjct 343532 CAGAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 343591
Query 156003 AT 156004
||
Sbjct 343592 AT 343593
>seq2
Length=1354397
Score = 107 bits (118), Expect = 3e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| || |||||||| || || || || || ||||| ||| |||||| | |||| ||
Sbjct 395605 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 395664
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || || || ||||| || ||||| || || || || |||||||||||||| | |
Sbjct 395665 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 395724
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGG 156015
|| |||||||| | ||||| |||||||| || || || | | ||||||| ||
Sbjct 395725 GCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACA--ACATCCAAAAGGAAT 395782
Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || || || || || ||||||| ||||| |||
Sbjct 395783 CCACTCTACACTTGGTTCTAAGATTGAGAGGTGGT 395817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871926812800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |