Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5 212 9e-50 seq6 129 9e-25 seq7 116 5e-21 seq2 107 3e-18 >seq5 Length=1086982 Score = 212 bits (234), Expect = 9e-50 Identities = 553/834 (66%), Gaps = 24/834 (3%) Strand=Plus/Plus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 ||| || | ||| || |||| | || ||||| ||||| ||||| || ||| || || Sbjct 838777 AGCCTTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGAT 838836 Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT--AATTCG 17977 | ||| ||||||||||| ||||| || || |||| ||||| || || Sbjct 838837 GTTCTCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTT--CTTGTTCCCGAAAGCG 838894 Query 17978 TATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCT 18037 | || |||||| || || || || || || || ||||| ||| |||||||| Sbjct 838895 ACCAGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCC 838954 Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCT 18094 | || |||| ||||||||||| || || | ||||| || ||||| || | || Sbjct 838955 AATAAA--GAAACGGGTAGAGCATCGATGAAGTACCTCTTT-TCGATCTCGACGGCTTCA 839011 Query 18095 TTTATTATGTTT---ATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATAT 18151 | || || ||| || | || | |||| ||||| | | ||| | | | Sbjct 839012 GTAATAATCTTTTCGATAATGGAAGGATCTGGC---TTATTCTTCAAATGAGCAAA---T 839065 Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211 | || ||| |||||||| || |||||||||||||||||| | || ||||||||| |||| Sbjct 839066 AGTAGACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAAC 839125 Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271 |||| || ||||||| |||| | || || | ||| || || | || || || ||| Sbjct 839126 GTTAGACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAA 839185 Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331 ||||| ||| |||| | ||||| || | ||||| || || || | ||| | || Sbjct 839186 AAGAAATAACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTG 839245 Query 18332 CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391 | | |||||| | |||||||| | | || || || | || || Sbjct 839246 TCCTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATC 839305 Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451 ||||| || || ||| |||| || | ||| || |||||||| || ||||||| ||| Sbjct 839306 GCATTGAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAA 839365 Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511 || | || || || ||| ||||||| || || |||| ||| || || |||| || Sbjct 839366 TAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCT 839425 Query 18512 GGATATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||| | || || | |||| | || || ||||||||||| |||||||| |||| Sbjct 839426 GGAATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGA 839484 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627 | || || || ||||| ||| |||||| | |||| || || || | | || Sbjct 839485 GGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTT 839544 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGA 18681 ||||| |||| ||||| || |||||||||| ||||| | ||||| || || Sbjct 839545 ATTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGA 839598 >seq6 Length=1070623 Score = 129 bits (142), Expect = 9e-25 Identities = 170/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || | || || ||||| || || |||||||| || ||||||||| | Sbjct 959571 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 959630 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| || || || ||| || ||||| || || || || || || || Sbjct 959631 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 959690 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | |||||| |||||||| || || || Sbjct 959691 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 959750 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || | || || || ||||||| ||||| |||| Sbjct 959751 A--ACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGTG 959802 >seq7 Length=946563 Score = 116 bits (128), Expect = 5e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || || || || || ||||| || |||||||||||| ||| Sbjct 343412 ATGCAGATTTTTGTCAAGACTTTAACCGGTAAGACTATAACTTTAGAAGTCGAATCTTCC 343471 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || || | ||| || |||||||| || || || || || || || Sbjct 343472 GATACTATTGACAATGTCAAGAGTAAGATTCAAGATAAGGAGGGGATTCCACCTGATCAG 343531 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | || |||||||| || |||||| |||||| |||| ||||| || Sbjct 343532 CAGAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 343591 Query 156003 AT 156004 || Sbjct 343592 AT 343593 >seq2 Length=1354397 Score = 107 bits (118), Expect = 3e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897 || || |||||||| || || || || || ||||| ||| |||||| | |||| || Sbjct 395605 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 395664 Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957 || || || || ||||| || ||||| || || || || |||||||||||||| | | Sbjct 395665 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 395724 Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGG 156015 || |||||||| | ||||| |||||||| || || || | | ||||||| || Sbjct 395725 GCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACA--ACATCCAAAAGGAAT 395782 Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | || || || || || ||||||| ||||| ||| Sbjct 395783 CCACTCTACACTTGGTTCTAAGATTGAGAGGTGGT 395817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871926812800