Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq7 143 5e-29 seq6 129 1e-24 seq2 129 1e-24 seq5 107 4e-18 >seq7 Length=946563 Score = 143 bits (158), Expect = 5e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || | ||| || |||| || || ||| || ||||| |||| |||| | |||| Sbjct 343623 AAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCT 343564 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || | ||| ||||| || ||||| |||||||| ||||||||||| || || || |||||| Sbjct 343563 TCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATCT 343504 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || ||| | || ||||| |||| ||| || ||||| ||||||| ||| || || Sbjct 343503 TGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGTC 343444 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| || || | ||| |||||||| Sbjct 343443 TTACCGGTTAAAGTCTTGACAAAAATCTGCAT 343412 >seq6 Length=1070623 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || ||||| | || || ||| || || ||||| Sbjct 959801 ACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 959742 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 959741 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 959682 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || ||||| || ||| || ||||| |||| || || ||||| || Sbjct 959681 GATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 959622 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| | ||||| || ||||| || || || || | || || ||||| || Sbjct 959621 TTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571 >seq2 Length=1354397 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 192303 AATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATA 192362 ||| ||||||||||| | | || || || |||| ||| | || || ||| || || Sbjct 395823 AATGATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTA 395764 Query 192363 ATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC 192422 || || || |||| | || |||||||| |||||||||||||| ||||| ||||| || Sbjct 395763 GTCGGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTC 395704 Query 192423 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGA 192482 |||||| || ||||| || ||||| || || || ||||| |||| || || || Sbjct 395703 AGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGA 395644 Query 192483 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 ||| ||||| | ||| ||||| |||||||| || || || Sbjct 395643 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 395605 >seq5 Length=1086982 Score = 107 bits (118), Expect = 4e-18 Identities = 483/767 (63%), Gaps = 12/767 (2%) Strand=Plus/Plus Query 49649 TAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAA 49708 || |||||| || || || ||||| || || ||| | || |||||||||||||| Sbjct 838900 TAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAA 838959 Query 49709 TTTAAATGGTAATGCATC-ATCAATAAATTCtttttctatttctacagcttgtttaatta 49767 || |||| ||||| || || | |||||| | || || || |||| |||| | Sbjct 838960 AGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAATAA 839018 Query 49768 tcataattatattattttttgataat--ttatatttaatatgattcgcatatattaaACA 49825 || | || || || ||| |||| || | |||| ||| ||| || ||| Sbjct 839019 TCTT--TTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGA---GCAAATAGTAGACA 839073 Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885 ||||||||| ||||||||||| || || || | || ||||| ||| ||| |||| || Sbjct 839074 TGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACC 839133 Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945 |||||||| ||| |||| || | ||| || || | ||||| || |||||||| Sbjct 839134 TGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATA 839193 Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005 ||| || | || || || | | ||| || | || || ||| | || || Sbjct 839194 ACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAAT 839253 Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065 ||| | |||||||| || || || | ||| || ||| || ||||| || || || || Sbjct 839254 CCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAA 839313 Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||| || |||| | ||||| | ||||| | || Sbjct 839314 TAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTC 839373 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 || || | |||||| ||||| || ||| || | | ||||||| | || Sbjct 839374 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTG 839433 Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245 ||||| | | ||| ||||||||||||||| ||| ||||||||||| || || || Sbjct 839434 CACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 839493 Query 50246 GAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAA---TTTTCCCAAGA 50302 ||| || || || || ||| | |||| || || || | | || | |||| Sbjct 839494 GAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATC 839553 Query 50303 TTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTT 50362 | || ||| || |||| ||| | ||||| ||||| || || || | | | | || Sbjct 839554 ATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTT 839613 Query 50363 ATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATC 50409 |||| ||| | || ||| | || || || ||||| ||| ||| Sbjct 839614 ATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATC 839660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479899090800