Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2 138 2e-27
seq6 129 1e-24
seq5 118 2e-21
>seq2
Length=1354397
Score = 138 bits (152), Expect = 2e-27
Identities = 165/224 (74%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || |||| ||| | || || || || ||
Sbjct 395822 ATGATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAG 395763
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 395762 TCGGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 395703
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| ||||| || || |||
Sbjct 395702 GGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGAT 395643
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 395642 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 395599
>seq6
Length=1070623
Score = 129 bits (142), Expect = 1e-24
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || ||||| | || || || ||
Sbjct 959809 TTCTTACCACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTG 959750
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 959749 TAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 959690
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || || || || ||||| || ||| || ||||| ||||| || ||
Sbjct 959689 TCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAA 959630
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| | ||||| || ||||| || || || || | ||| || ||||| ||
Sbjct 959629 GATTCGACTTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571
>seq5
Length=1086982
Score = 118 bits (130), Expect = 2e-21
Identities = 359/544 (66%), Gaps = 13/544 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|| ||||| ||||| ||| | ||||||||||| || || || || | | || ||
Sbjct 838781 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 838840
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAA- 38950
| ||| ||||||||||| || | || || |||| | | | | | | | |
Sbjct 838841 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCT-TGTTCCCGAAAGCGACCAG 838899
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
|| |||||| || || || ||||| || || ||| | || ||||||||||||||
Sbjct 838900 TAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAA 838959
Query 39011 TTTAAATGGTAATGCATC-ATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| |||| ||||| || || | |||||| | || || || |||| |||| |
Sbjct 838960 AGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAATAA 839018
Query 39070 tcataattatattattttttgataat--ttatatttaatatgattcgcatataGTAAACA 39127
|| | || || || ||| |||| || | |||| ||| |||||| |||
Sbjct 839019 TCTT--TTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGA---GCAAATAGTAGACA 839073
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||||||||| |||||||||||||| || || | || ||||| ||| ||| |||| ||
Sbjct 839074 TGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACC 839133
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
|||||||| ||| |||| || | ||| || || | ||||| || |||||||| ||
Sbjct 839134 TGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA-AT 839192
Query 39248 ACCCTCCACACAC-GCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
| ||| || | || || || | | ||| || | || || ||| | || ||
Sbjct 839193 AACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAA 839252
Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366
|||| | || ||||| || || || | ||| || ||| || ||||| || || || |
Sbjct 839253 TCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGA 839312
Query 39367 ATAA 39370
||||
Sbjct 839313 ATAA 839316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135909486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |