Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq8 187 7e-42
seq1 116 1e-20
seq3 93.3 1e-13
seq5 87.8 5e-12
>seq8
Length=833973
Score = 187 bits (206), Expect = 7e-42
Identities = 363/532 (68%), Gaps = 7/532 (1%)
Strand=Plus/Plus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
||||| |||||||| | |||| ||| || || || | || ||| |||| |||
Sbjct 325902 CCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTAC 325961
Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
| ||| ||| ||| ||| ||| ||||| ||||| ||||| |||||||| || |||
Sbjct 325962 AAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTG 326021
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
||||||| || ||| || || | || || ||||| || || || || ||||| |||
Sbjct 326022 AAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAA 326081
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215
|| | || |||| || || || || | ||||||||||| | |||||||| |
Sbjct 326082 CCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATA 326141
Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275
|| |||||||| | ||||| | ||||||| || || || ||||| | ||| | | |||
Sbjct 326142 GCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGG 326201
Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335
| || ||| | ||||| ||||| || ||||| ||||| || || || | ||||||
Sbjct 326202 AAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGA 326261
Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGAC-C 156393
|| || || | ||||| || || ||||| || ||| ||| | | | |
Sbjct 326262 ATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTC--GATGTCGTCAC 326319
Query 156394 CGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCAT 156453
| ||||||| | || || ||||| |||||| |||||||| || | | | ||||
Sbjct 326320 CATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCAT 326379
Query 156454 CAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505
|| | ||| || || | || ||||||||||| ||||| ||||| | |||
Sbjct 326380 TTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAA 326431
Score = 87.8 bits (96), Expect = 5e-12
Identities = 254/390 (65%), Gaps = 6/390 (2%)
Strand=Plus/Minus
Query 288957 TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGA 289013
||| | |||||| | || |||||||||||| || ||||| | | | | ||||
Sbjct 460170 TAACAATTGATTCAAAGTGGCTTCCCTTTCATCGTTAGAACCACCCATGGCACCACCTTT 460111
Query 289014 ATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATT 289073
| | || || ||||| | ||||| ||||| |||| ||| || | | || | |
Sbjct 460110 ACCTCT---TTCCTTACCGATGGCATCGATTTCATCAACGAAGATGATTGAAGGTGCCAT 460054
Query 289074 TTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTC 289133
|| ||| | | | || | || | || | || || || | ||| ||| |||||||
Sbjct 460053 TTTTCTACCTTGTTCGAAAAGATCACGAACTCTAGAAGCACCCACACCGACAAACATTTC 459994
Query 289134 TACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCT 289193
||| ||||||||| | || || | |||| |||| |||||| ||||| |||| |
Sbjct 459993 TACGAATTCAGAACCAGAGACAGACAAAAATGGTACACCTGCTTCACCTGCGGTTGCCTT 459934
Query 289194 CGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTT 289253
|||| | ||||||||||| |||||||| ||| ||| | | || || | ||
Sbjct 459933 TGCCAACAAAGTCTTACCTGTACCAGGTGGACCCGATAAGATGGCACCACGAGGAATCTT 459874
Query 289254 TGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTC 289313
||||| | | ||||| |||||| |||| || || | |||| |||| || ||
Sbjct 459873 GGCCCCGAGTGCTGTGTATTTGTCAGGGTTCTTCAAGAAATGAACAAATTCCATAATCTC 459814
Query 289314 ATATTTTGCCTCATCACATCCTGCTACATC 289343
| || || || | ||| ||||| || ||
Sbjct 459813 CTGCTTGGCTTCGTTACAACCTGCAACGTC 459784
>seq1
Length=1418021
Score = 116 bits (128), Expect = 1e-20
Identities = 338/510 (66%), Gaps = 14/510 (3%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| |||| |||||||| ||||| |||||||||||||| | ||||||||||| | |
Sbjct 640822 GCACCATGTGCGATCATACAGTCACGTTCCATTTCACCGAATCTGAGACCACCATCTCTA 640881
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| |||||||| | ||||| | || | | ||||||||| | | |||
Sbjct 640882 GATCTACCCTCAACTGGCTGTCTTGTCAAAACTTGCATAGGACCACGTGCTCTCGCATGA 640941
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664
||| |||| ||||| || | ||||| |||||| | | ||||||| |||||| |
Sbjct 640942 ATCTTGTCATCCACCATGTGTCTTAGACGTTGGTAGTACGTAGGACCGAAGAAGAT--TT 640999
Query 251665 GAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCA 251721
|| | ||| || | ||||| | | || ||||| |||||| ||| ||||| |
Sbjct 641000 GA-GCCATCAACTTTTTACCAGTATGTCCATTGTACATGACTTCGAAACCACGAGATTGA 641058
Query 251722 TAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTG 251781
|||||| | | |||| || |||| | | | | | | | | || ||| |
Sbjct 641059 TAACCATGCTCACGTAGAAGCTTAGAAATACCTTCCACAGTAATGTCGGTGAA--TGGAG 641116
Query 251782 C--CGTCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAGT 251838
|||| || | ||| | | | | | ||||| | | || || | |
Sbjct 641117 ATGCGTCACCTTCGTTACC-AGATAATGCTGCCACTTTACTAAGTAGACATTCGATTAAA 641175
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| |||| ||||||||| ||||| || |||||||||||||| | || ||| |
Sbjct 641176 TGCGCGACCGTCATACGAGATGGAATGGCGTGGGGATTGATGATTAGATCTGGTACAATA 641235
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| ||||||||||| ||||||||| | || | ||| || | |||||||| || |||||
Sbjct 641236 CCTTCAGCAGTGAATGGCATATCC-TCTCTACCGTAAGTGATACCAATAGTACCTTTTTG 641294
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||| ||| || ||||||||
Sbjct 641295 ACCGTGACGAGAGGCGAATTTGTCACCAAT 641324
Score = 102 bits (112), Expect = 2e-16
Identities = 443/690 (64%), Gaps = 17/690 (2%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||| ||| || || ||||| || || || || | | ||||| || | ||||||||
Sbjct 983798 CAACAGAAGCAAGGTTACAGACAGCTGTTTCGTCCTTAGAACTGTACTCAATAATCTCAC 983857
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
| || ||||| || ||||||| || |||||||||||||| ||||| || ||||
Sbjct 983858 AACAAAGGTTTGACGATCTGATGGTCCCCAAATTCTTCTGGTTTGATTTCTCATTGCAAG 983917
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
|| ||||| | ||| | || ||||||||| || || | | ||||| ||
Sbjct 983918 AGTCTTTGTACAACATGAAAGGACCTCCTGTCTCAATTTGACTTTGTAAAATCTCAGACC 983977
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATT--TCATATA 155824
| || | | || || || |||| | | || | || ||||| | |||||||
Sbjct 983978 ATAGTTTTTGAGCCTTGATCCGCTTCATTGGTAAACCATTCGTTTCATAATGCTCATATA 984037
Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884
|| || | || | ||||| ||| | ||||||||| || ||| || | |||
Sbjct 984038 -AGTCATCAA-ATTCTTTGCCGTACACATCGCATAGTCCAGGGGCCTCATCTGGACTAAA 984095
Query 155885 CAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| ||||| ||| || | || ||| ||| || | ||| ||| |
Sbjct 984096 CAAACACCAATCGCCATTG--GACTCGACCCGCCTCATGAACAGGTCAGGTATCCACAGC 984153
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
||| | || || || || || | || || | ||||| ||||| || |||| ||
Sbjct 984154 GCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGA 984213
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA-AACTACCATTCCTCTT 156061
|| || || || | ||| |||||| ||||| || |||| || || ||||||
Sbjct 984214 AAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTCCGGGCCTCTT 984272
Query 156062 G---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118
| ||||||||||||||||| | ||||| |||||||| || | ||||| |||| |
Sbjct 984273 GTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAA 984332
Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178
|| | || |||||| | || ||| ||| ||| ||| | || || ||
Sbjct 984333 GCCGCTCGACACACCATTGCTACCTGATATAAGCGCCCCATTTGATCTAATGTTGGAAAC 984392
Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT--ACAGTATTG 156236
||| || |||||||||||||| ||| |||| | | || || | | | || |||
Sbjct 984393 ATGAAGGCCAATACCACCTGAAGCTTTGGAAA--TCATGGCTGTCTTGTGAAGTGTCTTG 984450
Query 156237 AAAATACCTTCAATAGAATCATCTTCCATT 156266
|||||||| || ||||| || ||| ||||
Sbjct 984451 AAAATACCATCTATAGAGTCCTCTATCATT 984480
>seq3
Length=1292049
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 302552 TATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
|||| ||| || ||| || ||||||| | ||| | | ||||||||||||||||||||
Sbjct 406475 TATCGTAATGAACCATGATATCTTCCAGAGCCTTAACAAGACGACGCTGAATATAACCAG 406534
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
| | ||| || ||||| ||||| || | ||| ||||||||||||| || |||||||
Sbjct 406535 TCTCGGCTGTCTTGACAGCGGTATCGATCAAACCTTCACGACCACCCATTGCGTGGAAGA 406594
Query 302672 ATAGCTCTT 302680
| | ||||
Sbjct 406595 AGAATTCTT 406603
>seq5
Length=1086982
Score = 87.8 bits (96), Expect = 5e-12
Identities = 90/117 (77%), Gaps = 3/117 (3%)
Strand=Plus/Minus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | ||||| |||||||| | || ||||| | | || ||||||||||||||
Sbjct 376604 AATTTCCTTGATACGAGGAACACCCAGTGTAACGTT---CATCGAAGCAACACCAGCAAA 376548
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||| ||||| |||| ||| | ||||||| |||||||||||| ||| || ||||
Sbjct 376547 GTGAAAAGTTTTCAAAGTCATTTGAGTACCAGGCTCACCAATAGATTGAGCACCAAT 376491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817449138696
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