Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6 120 3e-22 seq2 111 1e-19 seq1 82.4 7e-11 >seq6 Length=1070623 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || | |||||||| |||||||| | ||||| ||| | | Sbjct 959573 GATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTC 959632 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || || || || || || || Sbjct 959633 TGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACCA 959692 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| |||| || || || Sbjct 959693 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 959752 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || | |||||||| | ||||| | || || || Sbjct 959753 CATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGTGG 959803 >seq2 Length=1354397 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | | ||||| | || | || || | Sbjct 395614 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCA 395673 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| ||||| || || || || |||||| | ||||||||||| || || Sbjct 395674 AAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 395733 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| || |||| |||| || || ||||| ||||||||||| || |||||| Sbjct 395734 CAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCCACTCTACAC 395793 Query 24908 TTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 ||||| | ||||| | || || | ||||||| Sbjct 395794 TTGGTTCTAAGATTGAGAGGTGGTATCATTGAGCCA 395829 >seq1 Length=1418021 Score = 82.4 bits (90), Expect = 7e-11 Identities = 166/242 (69%), Gaps = 7/242 (3%) Strand=Plus/Plus Query 139382 ACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACA 139441 |||| |||| || | || ||| |||||||||||||| || || ||||||| || || | Sbjct 984101 ACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAA 984160 Query 139442 GCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATG-TTAAGGAAATCA 139500 || ||| | || || | ||||| | || || | | || | | | || |||||| Sbjct 984161 ACAGATCTCTGGCTCTCATTTCTTCTTTA-CCGTGGTTCTTTCGAAGCTGTAGAAAATCA 984219 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT----TGCGCCTTTCCGTTTGCC 139556 | | ||| || |||||||| || ||||| || || || | || || ||||| Sbjct 984220 AGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAAGCTCCGGGCCTCTTGTTGCC 984278 Query 139557 ACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCT 139616 ||| ||||| || | || | ||| |||||||| ||||| | ||| || ||| ||||| Sbjct 984279 ACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCT 984338 Query 139617 CG 139618 || Sbjct 984339 CG 984340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240