Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2 190 4e-43
seq7 178 3e-39
seq6 172 1e-37
>seq2
Length=1354397
Score = 190 bits (210), Expect = 4e-43
Identities = 174/220 (79%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | ||||| ||||| ||||| ||||| || || || || || || |
Sbjct 395818 TACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGG 395759
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 395758 ACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 395699
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 395698 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 395639
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| || ||
Sbjct 395638 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 395599
>seq7
Length=946563
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | ||| | || ||| | |||| |||||||| ||||| || || ||||| ||
Sbjct 343639 ACCACCACGCAATCTCAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGA 343580
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|||| |||| || ||||||||||| || || || ||||| | ||| || ||||| || ||
Sbjct 343579 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGG 343520
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||||||||||||||| || ||||| ||||| ||||| || ||| ||
Sbjct 343519 AATCCCCTCCTTATCTTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGAC 343460
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| |||||||| ||||| || || || ||||| ||||| ||||||||
Sbjct 343459 TTCTAAAGTTATAGTCTTACCGGTTAAAGTCTTGACAAAAATCTGCAT 343412
>seq6
Length=1070623
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| ||| ||||| || || || || || |||||
Sbjct 959801 ACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 959742
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 959741 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 959682
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 959681 GATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 959622
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| || || ||||| || ||||| ||||| || || || |||||
Sbjct 959621 TTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 959574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981827099362712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |