Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 419 3e-112 seq5 248 1e-60 seq1 109 8e-19 >seq8 Length=833973 Score = 419 bits (464), Expect = 3e-112 Identities = 1462/2260 (65%), Gaps = 50/2260 (2%) Strand=Plus/Plus Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 ||||| | || ||||| | | || |||| || ||| | || ||||||||||| || | Sbjct 324586 CAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACCAGTCT 324645 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| ||| |||| ||||||||||||||||| || | ||| | ||||| | Sbjct 324646 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGGAGCAC 324705 Query 68489 CTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548 || ||||| |||| ||||| ||||||||| || | | | ||| || ||||| | Sbjct 324706 GGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGCCATCT 324765 Query 68549 TTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGATATCATC 68606 || ||| | ||||||| |||||||||| |||||| | ||||| || | | | | Sbjct 324766 CGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTTCT--TG 324823 Query 68607 TGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663 |||| ||| |||||| ||||| ||| ||| | || || | ||| || Sbjct 324824 AGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCATACT 324883 Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723 ||||| ||| | | || ||| | | || | | || || || ||||| || Sbjct 324884 ATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTTGGAA 324943 Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783 ||| || |||||||| | ||||| ||| ||||| || ||||| || | | | || || Sbjct 324944 TTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACTCGTT 325003 Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843 | || ||||| || | ||| || ||||||||||| || |||| | ||| ||||| Sbjct 325004 GTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGTTTCT 325063 Query 68844 AAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTA 68902 || ||||| | |||| || |||| | ||| ||||||||| ||||| |||||| Sbjct 325064 AACACCATATTCCTTGATGCTTTTCTTCAAAGTGTC-CCAATCCCATAGATCCGATGGTT 325122 Query 68903 CAACATTCCAAAGATCGTATTGTAGAATTCCGTTAC---TTGCATATGATCCATTATATG 68959 ||||| |||||||| || | ||| || | | ||| | || || | ||| | Sbjct 325123 TGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA---GAACCTTCATAAG 325179 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 | |||||||| |||| | || | ||||| || || || | | ||| || | Sbjct 325180 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 325239 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 | |||||||| || | | || ||||| | |||||| || || |||||| | | | Sbjct 325240 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 325299 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | | ||||| | || ||||| || | || || | | | |||||||| | |||| ||| Sbjct 325300 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 325359 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 | || || |||||| |||| || || || || ||| || | || || | || | Sbjct 325360 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 325419 Query 69200 GGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATC-----GTC----CAT 69250 | | || || | | | | | ||| ||||||| | | ||| ||| Sbjct 325420 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 325479 Query 69251 CTATAACAAACAT--ATTCAG--TGCTACAG------ATGCTAGATTACAAACTGCTACC 69300 | || | ||| | || || || || || | || | |||||||| || | Sbjct 325480 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 325538 Query 69301 TCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCC 69360 |||| || || || | | || || ||| | ||| |||| || || ||| Sbjct 325539 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 325598 Query 69361 AGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCA 69420 | || | || || |||||| | |||||||| || |||||||| || || ||||||||| Sbjct 325599 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 325658 Query 69421 GTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTG 69480 || || | |||||||| | |||| | ||| | ||| || || ||||| Sbjct 325659 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATA---GTCTTT 325715 Query 69481 -TAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537 || | | | || | || || ||| | ||| |||||||| || ||||| Sbjct 325716 CTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACA 325775 Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597 ||| ||| || ||| |||| ||||| | | ||| | ||| || ||| || | ||| Sbjct 325776 TCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACA 325835 Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657 |||||||| || | ||| |||||||| || ||| || | |||||| | | | | ||| Sbjct 325836 CGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCT 325895 Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717 || || || || || | ||| | || || | || || | ||||||||||| Sbjct 325896 TCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCC 325955 Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777 | || | || | | || || | ||| || || || ||||| | || | |||||| Sbjct 325956 AAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTG 326015 Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837 || || |||| | | ||| || || | || || || |||| || || || | |||| Sbjct 326016 TTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATA 326075 Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAG 69897 || || | | ||||| || || | ||| || || || || | ||||| Sbjct 326076 TATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAA 326135 Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTA 69957 || | |||||| ||||| || || || |||||||| ||| ||||| ||||| Sbjct 326136 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 326195 Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017 | || ||||| |||||| ||| | || ||| || ||||| || | || ||||| Sbjct 326196 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 326255 Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC 70077 || ||| |||| || | || | |||||| || || |||||||| || || || || Sbjct 326256 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCG 326315 Query 70078 -CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTT 70136 ||| |||||| || | || || | ||| | |||||| ||||| ||||| | || Sbjct 326316 TCACC-ATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTC 326374 Query 70137 ATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--T 70194 | |||||| ||| ||| || || ||||||||||| |||||||||||||| | | Sbjct 326375 ACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTT 326434 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA 70254 |||| ||||| || |||| |||| |||| || | | |||||||| |||| | || || Sbjct 326435 GAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATG 326492 Query 70255 TCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTG 70314 |||||||| | ||||| || ||||| | || || || || || ||||||||| Sbjct 326493 TCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 326552 Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374 || || || || || | | ||| |||| | || | |||||| ||||| || || Sbjct 326553 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 326612 Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTGCTAT 70433 |||||||| || || | | ||||||| |||||||| || || || || || | Sbjct 326613 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGT-CATATACGCACAAGT 326671 Query 70434 TTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAAC 70493 ||| ||||| || | || ||||| | ||| || || || | ||| | || ||| | Sbjct 326672 TTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGAT 326731 Query 70494 TTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT 70553 | || || || | || ||| || | | | || |||||||| ||||| | Sbjct 326732 ACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGA 326791 Query 70554 AATACGAGATGTAATTTTATCAAACATAACATTCTCCTTA 70593 ||||| | ||||| || || ||| |||||| |||||| Sbjct 326792 TATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTTA 326831 >seq5 Length=1086982 Score = 248 bits (274), Expect = 1e-60 Identities = 596/893 (67%), Gaps = 28/893 (3%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| ||| || | || ||||||||||| || || || ||| || || || Sbjct 838781 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 838840 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATT---ATAtttttttttAAATCCTAATTCTGAA 39442 |||||||||||||| || ||||| | || | |||| || || || || | Sbjct 838841 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTC---CCGAAAGCGACC 838897 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | |||||| || || || || | ||| ||||||| || ||||| || | Sbjct 838898 AGTAGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAAT 838957 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561 | ||| |||||||| || | | | | ||||||| |||| || ||||| || || || Sbjct 838958 AAAGAAACGGGTAGAGCATCGATGAAGTACCTCTTTT-CGATCTCGACGGCTTCAGTAAT 839016 Query 39562 TATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 ||| | | | | | || || | ||||| ||| | || || || Sbjct 839017 AATCTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGC 839076 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 || || ||||| || |||||||| | || |||||||||||||| || || || || Sbjct 839077 AAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGG 839136 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||||||||| ||| || | ||| || || |||||||| || || |||||||| || Sbjct 839137 CATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAACC 839196 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA---TTATGTATCCA 39798 ||| | || || || ||||| | ||||||| || | | | ||| | || ||||| Sbjct 839197 TTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCA 839256 Query 39799 CTTCTG--TGCCCAATCAGCTTTCTTCTTTACAC-AAGGCATTGTTTCTATAGCATTAAA 39855 |||| ||||| || || ||| |||||| | ||| || |||| || ||||| || Sbjct 839257 --TCTGATAGCCCATTCGGCCTTC-TCTTTAATCTGAGGAATGTTTTCAATCGCATTGAA 839313 Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915 | ||| |||| | ||| || | ||| ||||| |||||||| ||| | || Sbjct 839314 TAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTC 839373 Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975 ||| || |||||||| ||| || || || || || |||||| | ||||| | |||||| Sbjct 839374 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTG 839433 Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035 || |||| || || | || | ||||| ||||| ||||| |||||| || ||||| Sbjct 839434 CACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 839493 Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATTCC 40088 || ||||| ||| | || ||| || |||| | | ||| | ||||||| Sbjct 839494 GAAGGCCAAGACACGGGAGATGAAAAATCTTTC----GTTCTCATTCATACGGTTATTCC 839549 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 | |||| ||||| || |||| ||| | ||||| || ||||| ||||| |||||||| Sbjct 839550 AATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTC 839609 Query 40149 TTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTA 40201 | || ||| | ||| || ||| | |||| ||||| || | |||||||||| Sbjct 839610 TCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 839662 >seq1 Length=1418021 Score = 109 bits (120), Expect = 8e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661 |||| || || || || ||||| || || | ||| |||||||||| ||| ||||||| | Sbjct 984128 TCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTT 984187 Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721 | || || ||| ||| | ||||| || | || || | ||||||||| || |||| Sbjct 984188 TACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGAT 984247 Query 69722 ATATCGCCATGA-CTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 |||| || || | |||| || | || || || |||||||||| ||||| ||||||||| Sbjct 984248 ATAT-GCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTA 984306 Query 69781 TTATAGACTCTCAGCATCGGAA 69802 || | || | ||||| |||| Sbjct 984307 TTGAAAACGCGAAGCATTGGAA 984328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908731309120