Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5 178 1e-39 seq2 107 2e-18 >seq5 Length=1086982 Score = 178 bits (196), Expect = 1e-39 Identities = 400/593 (67%), Gaps = 10/593 (2%) Strand=Plus/Minus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| ||||| | || ||||| |||| ||||| || |||||| ||| || | |||| | Sbjct 839662 TAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAGA 839603 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG- 43814 ||| || || ||||| || ||||| ||||| | | || || | |||||| | Sbjct 839602 GGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAATAA 839543 Query 43815 -CATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 | | || | || |||| | ||| || || || ||||| || |||||||| Sbjct 839542 CCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTC 839483 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAG 43931 || || ||||| ||||| ||||| ||| || | | ||| ||||| ||| | |||| Sbjct 839482 TGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA-GAAGTGCAAATTCCAG 839424 Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991 |||| |||||| ||||| || ||||| || ||||| ||||| || || | || Sbjct 839423 AAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATT 839364 Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC-ATCGATTGTTTAATGCG 44050 || | || ||||| || ||||| ||| | || |||| || || || |||||| Sbjct 839363 CCCTGTTAATTGATACTTATATCAAGGATCCAAAGGA-AAGCGATTTCTTATTCAATGCG 839305 Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCA 44110 || |||| | ||| ||||||| | || || || ||||| | | |||||| | Sbjct 839304 ATTGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGAC 839245 Query 44111 AATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167 | ||| ||| || | ||| || | || || || || | | ||||| ||||||| Sbjct 839244 AGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGTTATTTCTTT 839185 Query 44168 TCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227 ||||| || ||||| || || || ||||| ||||| |||| | ||||| || | ||| Sbjct 839184 TCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACG 839125 Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 ||||| || || || || | | |||||||| |||||| ||||||||| || Sbjct 839124 TTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATG 839072 >seq2 Length=1354397 Score = 107 bits (118), Expect = 2e-18 Identities = 349/533 (65%), Gaps = 33/533 (6%) Strand=Plus/Plus Query 40761 GGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACAGT 40820 ||||||||| ||| |||||| |||| || || || | |||||| | | | | Sbjct 443497 GGTTGTACTGATGGTAAGAAGCTATCTGAGCAGGGGGTCAAAATTTGGGAGGGAAATGGA 443556 Query 40821 TCTAAAACATAT-TTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCC 40879 |||| | || ||| ||| | ||||| || || || ||| || ||| | || || Sbjct 443557 TCTAGAGAGTACCTTGATAAGC-TGGGATTGCACGAGAGACGTGAGGGAGATTTGGGGCC 443615 Query 40880 TGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT--GACA--CTATGTACTCTG 40935 |||||||||||||| | | | |||||||| || ||||| |||| | ||| || | Sbjct 443616 GGTTTATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACATGCGATG-AC---G 443671 Query 40936 ATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGAT----ACGATTAAATCC 40991 | || || ||||| | |||||||| | || | | ||| | | | || | Sbjct 443672 ACTACACTGGCCAAGGATTTGATCAATT---GGCCGATTT-GATCTCAAAGCTAAAGAAC 443727 Query 40992 GATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATG 41051 |||| | | || | || || || | || ||||| ||| | || | | | |||| Sbjct 443728 AATCCATACGACAGAAGAATCATCATGAGTGCATGGAATCCACCAGATTTCCCATCGATG 443787 Query 41052 GCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT-----TTGC----AATGGTGA- 41101 || ||||| || |||||| | || | |||||| || || || | ||||| | Sbjct 443788 GCTTTGCCGCCATGTCATGTCTTTTCTCAGTTCTATGTCAGTTTTCCTGAGAATGGAAAG 443847 Query 41102 -----ACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTT 41156 ||| || |||| | ||||||||||||| |||| ||||||||||| || || || Sbjct 443848 CCAAGACTTTCTTGTCTACTGTATCAAAGATCCTGTGATATGGGACTAGGAGTGCCCTTC 443907 Query 41157 AACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCT 41216 ||||| || ||||| || || || | ||| |||| || || | || | ||||| Sbjct 443908 AACATTGCATCGTATGCGCTTCTGACCAAGATGGTTGCCCATGTCTGCGATATGGAACCT 443967 Query 41217 GGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGA 41269 ||||| ||| |||| || | || |||| ||| |||||| ||||||| || Sbjct 443968 GGTGAGTTTATTCATACCATGGGTGATGCTCATGTTTACAAAGATCACATCGA 444020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455961248040