Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 286 4e-72 seq1 100 4e-16 >seq8 Length=833973 Score = 286 bits (316), Expect = 4e-72 Identities = 907/1393 (65%), Gaps = 35/1393 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | |||||||| || || || || || | ||| | || || | || || Sbjct 324968 GTACATATTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCTAGAATCTGGGAAGTCGA 325027 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 || ||||||||||| |||| | ||||| ||| | || ||| | |||||||||| | Sbjct 325028 CGCAGTTGGCATTGGGGCCAATAGCAAAGA--GTTTCTAACACCATATTCCTTGATGCTT 325085 Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTCAAACT 110882 | ||| | | ||||| || | | || | |||||| |||| ||| || ||| Sbjct 325086 TTCTTCAAAGTGTCCCAATCCCA-TAGATCCGATGGTTTGGTGTTCC-ACAGATCGTACT 325143 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGG----AACCTTGGGCT 110938 | | | ||||| || |||||||| ||| | || || | | |||| || Sbjct 325144 GCAAAATACCTTGAGAGATTGGAGAACCTTCATAAGTGGAGTAAGGTCCATCCTT---CT 325200 Query 110939 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 || ||||| |||||| || |||| || ||||| || || ||||| ||||| | Sbjct 325201 TC-GCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGATG 325259 Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 111058 || | ||||||||||| | || ||||||| || ||| ||||| || || || Sbjct 325260 TTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAGCC 325319 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118 | ||| | ||||| | | | |||||||||| || ||||||||| |||| || | Sbjct 325320 AAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAGGA 325379 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || || || | |||| || ||||| ||| | || || | || ||| | ||| Sbjct 325380 ACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAATT 325439 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-ATAC 111226 | ||| | || || ||||| | | |||| | ||| |||| | || Sbjct 325440 TTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATACAC 325499 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||||| || ||||| || ||||| || |||||||| ||| |||||| Sbjct 325500 GATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACTCA 325559 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | ||||| ||| ||||| || ||||| || ||||| ||||||||||| ||||| Sbjct 325560 ACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTT 325619 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 | || || ||||| ||||| |||||| | || || || ||||| || || |||| | Sbjct 325620 ATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAG 325679 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 ||||| | ||| | | ||| | | | | | || || || || |||| Sbjct 325680 ATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGTAA 325739 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526 | || | ||||||||| || ||||| | || || | |||||| || | | Sbjct 325740 CGTTCATACAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTT 325799 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 ||| |||| | || ||||| |||| || | ||| || |||||||| | ||||||||| Sbjct 325800 GGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATC 325859 Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646 || |||| || || | |||||| ||| |||||| | ||| ||||| || | Sbjct 325860 CAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATA 325919 Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---- 111702 || | ||| || | ||| || ||||||||||| || | || | |||| || || Sbjct 325920 TCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGC 325979 Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 |||| | || | |||||| ||||| || || ||| ||| || || || | ||| || Sbjct 325980 CTTTTGTTACC-ACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGG 326038 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822 || | || | || ||| || || || |||| || | | | | | Sbjct 326039 GATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGTT 326098 Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 || ||||||| |||||||| ||||| ||| || || ||||| ||| | | ||| Sbjct 326099 GTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGT 326158 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 | || ||||| | ||| ||||| ||||| ||||||| ||||| || |||||||| Sbjct 326159 ATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTG 326218 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGG 112001 || | ||| |||||||||||||| || ||||| | || |||||||| || || || Sbjct 326219 AGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGG 326277 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 ||||| | || ||||| | |||| || ||||| || || || || || | || | Sbjct 326278 ACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAA 326337 Query 112062 CCCGCATGAACAT 112074 | | ||| | ||| Sbjct 326338 CTCTCATAATCAT 326350 >seq1 Length=1418021 Score = 100 bits (110), Expect = 4e-16 Identities = 185/267 (69%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 111503 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACC 111562 ||| | || || || |||| ||||||| || | | |||| | ||| ||| ||| Sbjct 984064 TCGCATAGTCCAGGGGCCTCATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACC 984123 Query 111563 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 111622 ||| ||||||| ||||| || |||||||| | |||| |||||||| | ||| Sbjct 984124 CGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCT 984183 Query 111623 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 111682 || | ||| ||||| ||| | || || || || | ||| ||||| ||||||||||| Sbjct 984184 TCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCG 984243 Query 111683 AGATAGACTGCGAT-AGATC----CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737 ||||| | ||| || || || ||| | | | ||| | |||| |||||| | || | Sbjct 984244 AGATATA-TGCAATAAGCTCCGGGCCTCTTGTTG-CCACCCTGATCTACATATCTTGCAG 984301 Query 111738 TGGCGTTAAATACGCGAAGCATTGGAA 111764 || || || |||||||||||||||| Sbjct 984302 TGTTATTGAAAACGCGAAGCATTGGAA 984328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800