Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 277 2e-69 seq1 120 4e-22 >seq8 Length=833973 Score = 277 bits (306), Expect = 2e-69 Identities = 947/1467 (65%), Gaps = 23/1467 (2%) Strand=Plus/Minus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||| | | ||||| |||||||| ||||||| || ||| ||||| | || Sbjct 326443 AGAGATTTCAACTTTAACTATTTTGGGTTCAAAACTCTGGAGCGTTCTTATCTGCTGAGG 326384 Query 104198 CTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATT 104257 | |||||| | ||| || || | ||| | ||| | || || | |||||| Sbjct 326383 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 326324 Query 104258 CATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTT 104316 ||||| || ||||| || |||| | ||||| || | ||||||| || || || Sbjct 326323 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGATGTCCTTGAGATAC-TT 326265 Query 104317 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTG 104376 |||||| || | ||||| || |||||||||||||| ||| | || || ||||| || Sbjct 326264 CATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCATG 326205 Query 104377 CTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTG 104436 ||||| ||||||| ||||| ||||| ||| | ||||| || | ||| | | ||| || Sbjct 326204 TTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAATG 326145 Query 104437 TGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAA 104496 ||| || || ||| ||||| |||||||| ||||||| || | | | | | Sbjct 326144 TGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTAC 326085 Query 104497 TAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGT 104556 || |||| || || || ||| || | || | || || ||| | || || Sbjct 326084 GGGTTCATATATTGCAGGTACTAACGGTACTTCGAACGGGTTGATCCCCATGGTACGTGT 326025 Query 104557 ATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCG 104612 || ||| ||| || || ||||| |||||| | || | |||| || || ||| Sbjct 326024 CTTCAACAACACTGCTCGTTATGTGGATCAAGGT-GGTAACAAAAGGCCAGGTGCTTTCG 325966 Query 104613 CAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACC 104672 | | || | || ||||||||||| || ||| | || ||| | || | || |||| Sbjct 325965 CTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAGAACC 325906 Query 104673 AAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 104731 | ||| | || ||| | |||| | ||| | ||| | || ||||||||||||||| | Sbjct 325905 ACGGTAAGGAAGAGATTC-GTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCAGATTTG 325847 Query 104732 TTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCT 104791 |||||||| | ||| | |||| ||| | ||| || | || | |||| | || || Sbjct 325846 TTCATGAAACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCTCTCCAAGTGAAGCTCCA 325787 Query 104792 GGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAA 104851 ||| | || |||| ||||| || ||||||||| | || | |||| | ||| Sbjct 325786 GGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTGTATGAACGTTACGTCGCTGAA 325727 Query 104852 GGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAA 104911 ||||| | | ||| | |||| | ||||| | ||||| | | |||||| Sbjct 325726 GGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGCTATCTTGGAATCTCAA 325667 Query 104912 ACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAA 104971 || ||||||||||| |||| ||||||||||||||| |||||||| |||||| || ||| Sbjct 325666 ACAGAGACTGGTACTCCATTCATGCTTTACAAAGATGCCTGTAATATAAAGAGCAACCAA 325607 Query 104972 AAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGAC 105031 ||||| |||||| || || || || | ||| |||||| | || | ||| Sbjct 325606 AAGAACTTGGGTACCATTAAATCCTCTAACTTGTGTTGTGAAATCGTTGAGTACTCAGCA 325547 Query 105032 AAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC----------CAAGT- 105080 |||||||| || || |||||| | || || |||||| | || ||||| Sbjct 325546 CCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACCATCGTGTATTCAAGTT 325487 Query 105081 -ATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACT 105139 || ||| |||| || | ||||| || || | || || || | || | Sbjct 325486 GCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCATAAAATTGCCAAGGTT 325427 Query 105140 GTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGT 105199 |||| ||| | |||| || || ||| |||| | ||||| ||| ||| | Sbjct 325426 ATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCCAGTTCCTGAAGCTAGA 325367 Query 105200 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC 105259 || |||||||||||| || | || || | ||| ||||| | ||| | || || || || Sbjct 325366 AACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGGTTTGGCTGACGTGTTT 325307 Query 105260 ATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 || | | || ||||||| || | ||||| ||||| | || | || || Sbjct 325306 ATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCTAAACATCCAAATCTTC 325247 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379 || || || || ||||| || | || || | |||||||| || ||||| || Sbjct 325246 GAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGCGAAGAAGGATGGACCT 325187 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439 || || | ||| ||||||||| || ||||| | | || | ||| ||| |||| Sbjct 325186 TACTCCACTTATGAAGGTTCTCCAATCTCTCAAGGTATTTTGCAGTACGATCTGT-GGAA 325128 Query 105440 GGTGAGACCA-AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGG 105498 | |||| | || | || ||||| || | ||| || |||||||||| | || Sbjct 325127 CACCAAACCATCGGATCTATGGGATTGGGACACTTTGAAGAAAAGCATCAAGGAATATGG 325068 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | || | ||| | | || |||| ||||||||||| || || || | || || | || Sbjct 325067 TGTTAGAAACTCTTTGCTATTGGCCCCAATGCCAACTGCGTCGACTTCCCAGATTCTAGG 325008 Query 105559 TAATAATGAATGCTTTGAACCCTACAC 105585 | | || || || || || || ||||| Sbjct 325007 TTACAACGAGTGTTTCGAGCCATACAC 324981 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTTG 154175 |||| || |||||||||| || || |||||||| || ||| || || || || || | Sbjct 455976 TTGCCCCCAGATCTGGTCTAGCAGTCAAACATGGGATTCAAACCGGCGCTGGAGTGGTCG 455917 Query 154176 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTTG 154235 || |||||||| ||||||||||||||||| ||||| || || |||| || || | Sbjct 455916 ATAGGGACTACACTGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAACAAGGATTTCG 455857 Query 154236 AGGTAAAGAGGGGTGA 154251 || | || | ||||| Sbjct 455856 AGATTAACAAAGGTGA 455841 >seq1 Length=1418021 Score = 120 bits (132), Expect = 4e-22 Identities = 278/408 (68%), Gaps = 17/408 (4%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||||||||| |||||||||||| | || | ||| | |||||| |||||| | Sbjct 445159 AAACCATCCATCTCAACCAAAAGTTGGTTCAAGGTATTTTCTCTTTCATCGTTCGCTC-C 445101 Query 9674 ATACCACCAGCACT---GCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACGAT 9729 | || || | ||||||| ||| |||||||| ||||| |||||||| || Sbjct 445100 TGAAATGTTGCCCTTTTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 445041 Query 9730 GCATGGTTGATTTTCGCGAGCGA-CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788 |||| || || | |||| ||| || || || || || | | || || |||| Sbjct 445040 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAG-TCACGCACTCTCGAAGCACCGACAC 444982 Query 9789 CAACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGAT 9844 | |||||||| || ||||| | ||| || |||| | | ||| ||||| || | Sbjct 444981 CGACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCT 444926 Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904 ||||| ||| |||| || | ||||||||||| |||||||| ||| | ||| | Sbjct 444925 TCACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATA 444866 Query 9905 GCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTT-AAGAAAATC 9963 ||||||| ||||||||| || || || |||||||| ||||| || |||||| | Sbjct 444865 GCACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACT- 444807 Query 9964 CACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 10011 || | || | ||| |||||||| ||||| || ||||||| Sbjct 444806 GACGAACTCCATAATTTCCTCTTTGGCTTCGTCACATCCGGCAACATC 444759 Score = 100 bits (110), Expect = 3e-16 Identities = 186/269 (69%), Gaps = 7/269 (3%) Strand=Plus/Minus Query 104541 TTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAA 104600 |||||||||||||||| || || ||| || | |||||| |||| | ||| | | | Sbjct 984328 TTCCAATGCTTCGCGTTTTCAATAACACTGCAAGATATGTAGATCAGGGTGG-CAACAAG 984270 Query 104601 AGG----GATCT-ATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 104655 ||| || || || ||| | ||||| ||||||||||| ||||| ||| | || || || Sbjct 984269 AGGCCCGGAGCTTATTGCA-TATATCTCGAGCCATGGCATGCGGACATCCTTGATTTTCT 984211 Query 104656 TGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCT 104715 || | || ||||| ||| | || || | | | | ||||| || | || || Sbjct 984210 ACAGCTTCGAAAGAACCACGGTAAAGAAGAAATGAGAGCCAGAGATCTGTTTTTTGCGCT 984151 Query 104716 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 104775 ||||| || || || ||||||| | | || ||| | |||| |||||| | | ||| | Sbjct 984150 GTGGATACCTGACCTGTTCATGAGGCGGGTCGAGTCCAATGGCGATTGGTGTTTGTTTAG 984091 Query 104776 TCCAGACAAGGCACCTGGTCTCTCCGATG 104804 |||||| |||| ||||| || | ||||| Sbjct 984090 TCCAGATGAGGCCCCTGGACTATGCGATG 984062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260741673920