Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq8 116 4e-21
>seq8
Length=833973
Score = 116 bits (128), Expect = 4e-21
Identities = 294/437 (67%), Gaps = 10/437 (2%)
Strand=Plus/Minus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
||||| | || || | ||||| || ||||| |||||||| | ||||||||||||
Sbjct 326269 TACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCT 326210
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||||| | || |||||||||||||| ||||| || || ||||| || | |||
Sbjct 326209 TCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAG 326150
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448
|| ||||| || || ||| | |||||||| ||| | ||| | | | ||| | ||
Sbjct 326149 GAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACAC-AACATTCG 326091
Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCCTATG 53506
| | | || || || || || ||||| | ||| | || | | || |||
Sbjct 326090 TTCTACGGGTTCATATATTGCAGGTACTAACGGTACTTCG--AACGGGTTGATCCCCATG 326033
Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT-GGGAAGCGCAAGGG 53565
| || |||||||||||||| || || || || | || |||||| || || |||
Sbjct 326032 GTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGT 325973
Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625
| | ||||| | ||| | || || |||||||| ||||| | || || | || | ||
Sbjct 325972 G-CTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCG 325914
Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTC 53684
||| || ||| | |||||||| || ||| | || |||| |||| || |||||||
Sbjct 325913 GAAGAACCACGGTAAGGAAGAGATTCG-TGCAAGAGATTTGTTCCCAGCCCTCTGGATTC 325855
Query 53685 CGGACCTCTTCATGCAA 53701
| || | |||||| ||
Sbjct 325854 CAGATTTGTTCATGAAA 325838
Score = 98.7 bits (108), Expect = 1e-15
Identities = 164/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 55694 GGGTCCGTCCAGAATCT---GGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750
|| ||| |||| ||||| | | ||||||| || ||||| | ||| ||| ||
Sbjct 324853 GGCTCCATCCAAAATCTACCGAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTT 324794
Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810
||||| || | || || | | | || || ||| |||||||||| || ||||||||
Sbjct 324793 TGGGAAATCTCTCAAAAAACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGAT 324734
Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-AT 55869
|||||||| || ||||||| ||| ||| | ||| || |||| || | ||
Sbjct 324733 CAGTCCCAATCATTGAACATTCACATCCGTGCTCCAACTATGGGTAAATTGA-CTAGTAT 324675
Query 55870 GCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
||| || ||||| ||||||||||| | ||||| ||||||||||| ||| ||||
Sbjct 324674 GCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTACCTGAGGAC 324621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215945278400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |