Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 116 4e-21 >seq8 Length=833973 Score = 116 bits (128), Expect = 4e-21 Identities = 294/437 (67%), Gaps = 10/437 (2%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| | || || | ||||| || ||||| |||||||| | |||||||||||| Sbjct 326269 TACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCT 326210 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||||| | || |||||||||||||| ||||| || || ||||| || | ||| Sbjct 326209 TCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAG 326150 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 || ||||| || || ||| | |||||||| ||| | ||| | | | ||| | || Sbjct 326149 GAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACAC-AACATTCG 326091 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCCTATG 53506 | | | || || || || || ||||| | ||| | || | | || ||| Sbjct 326090 TTCTACGGGTTCATATATTGCAGGTACTAACGGTACTTCG--AACGGGTTGATCCCCATG 326033 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT-GGGAAGCGCAAGGG 53565 | || |||||||||||||| || || || || | || |||||| || || ||| Sbjct 326032 GTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGT 325973 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | | ||||| | ||| | || || |||||||| ||||| | || || | || | || Sbjct 325972 G-CTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCG 325914 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTC 53684 ||| || ||| | |||||||| || ||| | || |||| |||| || ||||||| Sbjct 325913 GAAGAACCACGGTAAGGAAGAGATTCG-TGCAAGAGATTTGTTCCCAGCCCTCTGGATTC 325855 Query 53685 CGGACCTCTTCATGCAA 53701 | || | |||||| || Sbjct 325854 CAGATTTGTTCATGAAA 325838 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 55694 GGGTCCGTCCAGAATCT---GGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750 || ||| |||| ||||| | | ||||||| || ||||| | ||| ||| || Sbjct 324853 GGCTCCATCCAAAATCTACCGAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTT 324794 Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810 ||||| || | || || | | | || || ||| |||||||||| || |||||||| Sbjct 324793 TGGGAAATCTCTCAAAAAACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGAT 324734 Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-AT 55869 |||||||| || ||||||| ||| ||| | ||| || |||| || | || Sbjct 324733 CAGTCCCAATCATTGAACATTCACATCCGTGCTCCAACTATGGGTAAATTGA-CTAGTAT 324675 Query 55870 GCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 ||| || ||||| ||||||||||| | ||||| ||||||||||| ||| |||| Sbjct 324674 GCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTACCTGAGGAC 324621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215945278400