Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 2e-24
seq6 127 2e-24
seq7 125 8e-24
seq2 107 2e-18
>seq8
Length=833973
Score = 127 bits (140), Expect = 2e-24
Identities = 345/519 (66%), Gaps = 17/519 (3%)
Strand=Plus/Plus
Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290
|||||||| || || ||||||||||| | ||||| || | ||| || ||| ||
Sbjct 325839 TTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCA-CGAATCTCTTC 325897
Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350
| ||| ||||| || | || | || || | |||||| || |||||||| ||||
Sbjct 325898 CTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAA 325957
Query 81351 ATACACGGCGATCG-ACC---CCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCG 81406
|||| |||| | ||| |||| | ||||| || | || ||||| |||||
Sbjct 325958 GTACAAAGCGAAAGCACCTGGCCTTTTGTTA-CCACCTTGATCCACATAACGAGCAGTGT 326016
Query 81407 CGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATAC 81466
||| || ||||| | ||| ||||| | || | || |||||| ||||| | |||
Sbjct 326017 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 326076
Query 81467 GCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAA 81525
|| ||| | | || | ||| || || || ||| || ||||| | ||| |||
Sbjct 326077 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAA-ACCAATACCACCAGCGGTCTTAGAA 326135
Query 81526 ATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCA 81585
||| |||||| |||| || || ||||| ||||||||| || | |||||| |
Sbjct 326136 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 326195
Query 81586 AGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTC 81645
| | |||||| ||||||||||||| | | || |||||||| || ||||| |
Sbjct 326196 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 326255
Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT----GACGCGTGGAAT 81701
|| |||||||| || | |||||||| | ||| || || | ||| || ||
Sbjct 326256 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCG----AT 326311
Query 81702 ATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740
|||||||| |||||||| | ||| || | ||||| |||
Sbjct 326312 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCAT 326350
>seq6
Length=1070623
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| | || || || || |
Sbjct 959574 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 959633
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| |||| || || ||||||||||| || || || |||||
Sbjct 959634 GACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 959693
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 959694 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 959753
Query 27586 GTCCAAAAGGAATCCACT 27603
|||||||||||||||||
Sbjct 959754 ATCCAAAAGGAATCCACT 959771
>seq7
Length=946563
Score = 125 bits (138), Expect = 8e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||||||||| | ||||| |||||||| ||| | || || || ||
Sbjct 343412 ATGCAGATTTTTGTCAAGACTTTAACCGGTAAGACTATAACTTTAGAAGTCGAATCTTCC 343471
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | ||| ||| ||||| || |||||||| ||||| || || |||
Sbjct 343472 GATACTATTGACAATGTCAAGAGTAAGATTCAAGATAAGGAGGGGATTCCACCTGATCAG 343531
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || || || ||||||||||| || |||| | || ||| | || || ||
Sbjct 343532 CAGAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 343591
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || | ||||| || ||| | | || |||||
Sbjct 343592 ATCCAGAAGGAATCTACCTTGCATCTGGTTTTGAGATTGCGTGGTGG 343638
>seq2
Length=1354397
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 395599 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 395658
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || || || ||||| || | |
Sbjct 395659 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 395718
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | || | | ||||| || ||||||||
Sbjct 395719 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAG 395778
Query 27595 GAATCCACTCTTCA 27608
||||||||||| ||
Sbjct 395779 GAATCCACTCTACA 395792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310342968960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |