Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 127 2e-24 seq6 127 2e-24 seq7 125 8e-24 seq2 107 2e-18 >seq8 Length=833973 Score = 127 bits (140), Expect = 2e-24 Identities = 345/519 (66%), Gaps = 17/519 (3%) Strand=Plus/Plus Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290 |||||||| || || ||||||||||| | ||||| || | ||| || ||| || Sbjct 325839 TTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCA-CGAATCTCTTC 325897 Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350 | ||| ||||| || | || | || || | |||||| || |||||||| |||| Sbjct 325898 CTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAA 325957 Query 81351 ATACACGGCGATCG-ACC---CCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCG 81406 |||| |||| | ||| |||| | ||||| || | || ||||| ||||| Sbjct 325958 GTACAAAGCGAAAGCACCTGGCCTTTTGTTA-CCACCTTGATCCACATAACGAGCAGTGT 326016 Query 81407 CGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATAC 81466 ||| || ||||| | ||| ||||| | || | || |||||| ||||| | ||| Sbjct 326017 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 326076 Query 81467 GCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAA 81525 || ||| | | || | ||| || || || ||| || ||||| | ||| ||| Sbjct 326077 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAA-ACCAATACCACCAGCGGTCTTAGAA 326135 Query 81526 ATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCA 81585 ||| |||||| |||| || || ||||| ||||||||| || | |||||| | Sbjct 326136 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 326195 Query 81586 AGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTC 81645 | | |||||| ||||||||||||| | | || |||||||| || ||||| | Sbjct 326196 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 326255 Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT----GACGCGTGGAAT 81701 || |||||||| || | |||||||| | ||| || || | ||| || || Sbjct 326256 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCG----AT 326311 Query 81702 ATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 |||||||| |||||||| | ||| || | ||||| ||| Sbjct 326312 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCAT 326350 >seq6 Length=1070623 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| | || || || || | Sbjct 959574 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 959633 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| |||| || || ||||||||||| || || || ||||| Sbjct 959634 GACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 959693 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 959694 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 959753 Query 27586 GTCCAAAAGGAATCCACT 27603 ||||||||||||||||| Sbjct 959754 ATCCAAAAGGAATCCACT 959771 >seq7 Length=946563 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | ||||| |||||||| ||| | || || || || Sbjct 343412 ATGCAGATTTTTGTCAAGACTTTAACCGGTAAGACTATAACTTTAGAAGTCGAATCTTCC 343471 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||| ||| ||||| || |||||||| ||||| || || ||| Sbjct 343472 GATACTATTGACAATGTCAAGAGTAAGATTCAAGATAAGGAGGGGATTCCACCTGATCAG 343531 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || || ||||||||||| || |||| | || ||| | || || || Sbjct 343532 CAGAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 343591 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || | ||||| || ||| | | || ||||| Sbjct 343592 ATCCAGAAGGAATCTACCTTGCATCTGGTTTTGAGATTGCGTGGTGG 343638 >seq2 Length=1354397 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 395599 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 395658 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || || || ||||| || | | Sbjct 395659 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 395718 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | || | | ||||| || |||||||| Sbjct 395719 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAG 395778 Query 27595 GAATCCACTCTTCA 27608 ||||||||||| || Sbjct 395779 GAATCCACTCTACA 395792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310342968960