Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 140 8e-28 seq6 129 1e-24 seq7 113 1e-19 >seq2 Length=1354397 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||| |||||||| || ||||||||||| || || | | || || || Sbjct 395805 TCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 395746 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 395745 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 395686 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || || || || |||||||| |||||| || | |||||| Sbjct 395685 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 395626 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 395625 GGTCTTACCAGTCAAAGTCTTGACGAA 395599 >seq6 Length=1070623 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||||||| | ||| | |||||| || ||||||||||| || || | | || || || Sbjct 959789 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 959730 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | || ||||| Sbjct 959729 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 959670 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || || |||||||| ||| || || | || || Sbjct 959669 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 959610 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| || || | ||||| || Sbjct 959609 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571 >seq7 Length=946563 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || |||||||| ||||| | || || ||||||||||| || ||||| ||| Sbjct 343608 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 343549 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | | || || ||||| |||| || ||||| || || ||||| || Sbjct 343548 GCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGAATCTTACTCTTG 343489 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || || || || || || ||| || || | ||| || ||||| || || | |||| Sbjct 343488 ACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGTCTTACCGGTTAAAGTC 343429 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | |||||| Sbjct 343428 TTGACAAAAATCTGCAT 343412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151881186920