Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6 170 5e-37 seq2 170 5e-37 seq7 125 2e-23 seq3 91.5 4e-13 >seq6 Length=1070623 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | ||||||||| ||||||| ||||| || | ||||||||| || Sbjct 959789 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 959730 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || || ||||| ||||| Sbjct 959729 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 959670 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || || ||||| || | ||| || || || || || Sbjct 959669 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 959610 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || |||||||| || | ||| | |||||| || Sbjct 959609 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571 >seq2 Length=1354397 Score = 170 bits (188), Expect = 5e-37 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| ||||||||||| ||||||| ||||| |||| ||||||||| || Sbjct 395805 TCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 395746 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| ||||| ||||| | || ||||||||| || || ||||||||||| Sbjct 395745 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 395686 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| ||| || || ||||| || | ||| || || || ||||| Sbjct 395685 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 395626 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || |||||||| || | ||| Sbjct 395625 GGTCTTACCAGTCAAAGTCTTGACGAA 395599 >seq7 Length=946563 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| || || || | || ||||| || |||| |||||||||| | ||| Sbjct 343633 ACGCAATCTCAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGT 343574 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||||||||| ||||| || |||||||| | || || || || || ||||| || Sbjct 343573 TCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCC 343514 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||||| ||| ||| || || || || || | ||| || ||||| Sbjct 343513 CTCCTTATCTTGAATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAA 343454 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || ||||| || || ||||| || Sbjct 343453 AGTTATAGTCTTACCGGTTAAAGTCTT 343427 >seq3 Length=1292049 Score = 91.5 bits (100), Expect = 4e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || ||||| || || || |||||||| || |||||||| Sbjct 520842 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATAAGCGGAGACATCACC 520901 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| || |||| ||| || || || || | || |||||||| Sbjct 520902 ACCTTGGGTCTCGATAACTGGCAAAGCGGTCAAAGAACCACCACC 520946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531077765552