Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8 372 4e-98 seq5 277 2e-69 seq1 138 2e-27 >seq8 Length=833973 Score = 372 bits (412), Expect = 4e-98 Identities = 1338/2077 (64%), Gaps = 39/2077 (2%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| || | || || ||||| | || ||| |||| || ||| | || |||||||||| Sbjct 324580 TCTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATAC 324639 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 |||| || | |||| |||| |||||||||||||| || |||| ||| | | | Sbjct 324640 CAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTG 324699 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 || | || ||||| |||| || || ||||||||| || | | | |||||| | Sbjct 324700 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 324759 Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 |||| | || || || ||||||| |||||||||| ||| ||| | | | || | | Sbjct 324760 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTT 324819 Query 77011 CATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATT-CTTT 77066 | | |||| || | |||||| ||||| ||| ||| | || || || || ||| Sbjct 324820 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGAT-GTGTTGCTTC 324878 Query 77067 ATATCATCATTCCACAATTTCCTC--TCTGTTAAAACTCTAAGGAGATGAGGATTAACTA 77124 ||| ||||| ||| | | ||| || ||| | | || | | ||| || || | Sbjct 324879 ATACTATCATCCCAGA--TACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAA 324936 Query 77125 TTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 77184 |||| ||||| || || || || | ||||| ||| ||||| || ||||| || | | Sbjct 324937 TTTGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAAC 324996 Query 77185 ATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAAC 77244 | || |||| || | ||| || | ||| || ||||||||||| || |||| | ||| Sbjct 324997 ACTCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAG 325056 Query 77245 TATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 77304 ||||| | ||||| | |||| | | || | | | ||||||||| ||||| | Sbjct 325057 AGTTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCG 325116 Query 77305 AAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT-GATCCATTA 77363 | ||| | ||| |||||||| || | ||| || | | || | || || | | Sbjct 325117 ATGGTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAG-AGATTGGAGAACCTTCA 325175 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 || || |||||||| || | | || | ||||| |||||||| | ||| Sbjct 325176 TAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGG 325235 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 || || |||||||| || | | || ||||| | ||||| | ||||| ||| | Sbjct 325236 TAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACA 325295 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | || | ||||| | || || || || | || || | | | |||||||| | |||| Sbjct 325296 CGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTC 325355 Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603 |||| || || ||||||| |||| || || || || || || | || || | Sbjct 325356 ATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAG 325415 Query 77604 TTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--------TCTT- 77654 || | | | || || | | | | | || ||||||| | |||| Sbjct 325416 TTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTA 325475 Query 77655 CCATCTATAACAA-------ACATGTTC--AAAGCTATAGATGCTAGATTACAAACTGCT 77705 ||||| | ||| ||| | | ||||| || || || | |||||||| || Sbjct 325476 CCATCATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCA 325535 Query 77706 ACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTG 77765 ||||| || | || | | || || ||| | ||| |||| || || Sbjct 325536 GTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTA 325595 Query 77766 CCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTC 77825 |||| || | ||||||||||||| |||| || | || || ||||| || || ||||| Sbjct 325596 CCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTA 325655 Query 77826 CCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT 77885 || || || | || ||||| | |||| | ||| | | |||||| || | | Sbjct 325656 CCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--T 325713 Query 77886 TTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCG--TTCAAATTCATCTCCCCAAA 77943 || || | | | || | | || ||| | |||||||||||| || ||| Sbjct 325714 TTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 325773 Query 77944 CATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAA 78003 ||||| ||| || || |||| |||| | | ||| | ||| ||||||| || | || Sbjct 325774 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 325833 Query 78004 CTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTT 78063 | |||||||| || | ||| || ||||| || || || | ||||| | | | | Sbjct 325834 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 325893 Query 78064 CTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 78123 |||| || || ||||| | ||| | || || | || || | |||||||||| Sbjct 325894 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 325953 Query 78124 CTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGG 78183 | | || | || | | | || || | ||| ||||| || ||||| | ||| | || | Sbjct 325954 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 326013 Query 78184 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAA 78243 |||| || | || | | ||| || || | ||||| || || || || || || | || Sbjct 326014 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 326073 Query 78244 TATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAG 78303 |||| || | | ||||| || ||| | || || || || || |||||| Sbjct 326074 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 326133 Query 78304 ATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | || | ||| || ||||| |||||||| |||||||| || ||||||| ||||| Sbjct 326134 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 326193 Query 78364 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAG 78423 | || ||||| |||||| ||| | | ||| || ||||| || | || |||| Sbjct 326194 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 326253 Query 78424 ATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT 78483 | ||||| | || || | || | ||||| || || |||||||| || || |||| Sbjct 326254 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 326313 Query 78484 CCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 | |||||| || || || || | ||| | |||||| ||||| | |||| | | || Sbjct 326314 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGC-GACT 326372 Query 78544 T-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA- 78601 | | |||||| ||| || || || |||| |||||| || ||||||||||| | Sbjct 326373 TCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAG 326432 Query 78602 -TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAA 78660 ||||| ||||| || |||| |||| |||| || | | ||| || | |||| | || | Sbjct 326433 TTGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGA 326490 Query 78661 TATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGT 78720 | ||||| || || || |||||||| | || || || || || || ||||||| Sbjct 326491 TGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGT 326550 Query 78721 TAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATA 78780 | || || || || || | | ||| |||| | || | |||||| | |||||| | Sbjct 326551 TGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGA 326610 Query 78781 CAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 ||||||||| || || | | |||||||||||||||| Sbjct 326611 TAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATG 326647 >seq5 Length=1086982 Score = 277 bits (306), Expect = 2e-69 Identities = 591/872 (68%), Gaps = 28/872 (3%) Strand=Plus/Plus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || ||||||||||| || || || ||| || || || ||||| ||||||||||| ||| Sbjct 838802 TTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAATGGGTTA 838861 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990 | || ||| ||| || || || | | |||||||| || ||||| || Sbjct 838862 GTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGACGAACTCA 838921 Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT- 48049 | || ||||||| || ||||| || | | ||| |||||||| || | Sbjct 838922 ACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGCATCGATG 838981 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCC-----ACTATTATCGATGTT--ACCGTTT 48102 ||| | ||||| |||||| ||| || || | | || ||||| | | | | Sbjct 838982 AAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGAAGGAT- 839039 Query 48103 CCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGAC 48162 || ||| || | |||||| ||| | || |||||||||||| ||| | || Sbjct 839040 -CTGGCTT-----ATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAAC 839093 Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| | || |||||||||||||| || ||||| |||||||| || || | Sbjct 839094 CTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCT 839153 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | ||| || || || || || || || |||||||| ||||| | ||| || || | Sbjct 839154 TCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAACCTTCAATGGCAGCGAAAG 839213 Query 48283 CGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAG 48339 | | ||||||| || | | | ||| ||| | ||||| | ||||| || | Sbjct 839214 CAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGG 839273 Query 48340 CCTTCTTCTTTACACA-AGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 |||||| ||||| | ||| || |||| || ||||| || | || | |||| || Sbjct 839274 CCTTCT-CTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGAAATCGCTTTCCTTT 839332 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 ||| || | |||||||| ||||| || ||| | || |||||||| ||||| || Sbjct 839333 GGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATC 839392 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC--AAAATC 48516 || || || || || |||||| | ||||||| || || || || | || ||| || Sbjct 839393 ATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAATTC 839452 Query 48517 GTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTT 48576 ||| | ||||||||||||||||| |||||| |||||||| || || || ||| | Sbjct 839453 --TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGG 839510 Query 48577 TAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATA 48633 || ||| || ||||||| | ||| | |||||||| |||| ||||| || |||| Sbjct 839511 AGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGAATATCCTTCGATA 839570 Query 48634 TATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATAT 48693 ||| | ||||| || ||||| || || ||||||||| | |||||| | ||| || | Sbjct 839571 GATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCT 839630 Query 48694 CACTGTATTGGATTGGGAAAATAACAAATCTA 48725 || ||||| ||||||||| | |||||||||| Sbjct 839631 CATGGTATTTGATTGGGAATAGAACAAATCTA 839662 >seq1 Length=1418021 Score = 138 bits (152), Expect = 2e-27 Identities = 218/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 ||||||| || ||||| |||||||| | || | ||||| | ||||||| Sbjct 984020 TTTCATAATGCTCATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGG 984079 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 |||| ||| | | ||| |||| || |||| || || || |||| || || | Sbjct 984080 CCTCATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACCCGCCTCATGAACAGGT 984139 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||||||||| || |||| ||| ||||||| || ||| |||||| || || |||| Sbjct 984140 CAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCT 984199 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 || ||| | ||||| || | || || | ||||||||| || ||||||| ||| |||| Sbjct 984200 TTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATA-TGCAATAA 984258 Query 78142 -CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200 |||| || | || || || |||||||||| |||||| || |||||||| |||| | Sbjct 984259 GCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGA 984318 Query 78201 AACATTGGAA 78210 | |||||||| Sbjct 984319 AGCATTGGAA 984328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668730533120