Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 6e-23
seq2 107 4e-18
seq6 102 2e-16
>seq7
Length=946563
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||| | ||||| || || |||||||||||||||| || |||||| |||||||||
Sbjct 343620 ACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 343561
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || |||||||| | |||||||| || | | || || ||||| ||||||
Sbjct 343560 AGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGA 343501
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || |||||| | || | | || ||| || ||||| | ||| ||||| ||
Sbjct 343500 ATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGTCTTA 343441
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCTTACT 152116
|| || | |||||| || || | |||||| | | ||||||
Sbjct 343440 CCGGTTAAAGTCTTGACAAAAATCTGCATCCTGCTCTTACT 343400
>seq2
Length=1354397
Score = 107 bits (118), Expect = 4e-18
Identities = 144/199 (72%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| || || |||||||||||||| |||| |||||||| || ||||| |
Sbjct 395796 CAAG-TGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCA 395738
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | ||| |||||||| |||||||
Sbjct 395737 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAA 395678
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| |||||| | || | |||| ||| || ||||| | ||| || || || |
Sbjct 395677 TCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTAC 395618
Query 152077 CCGTGAGAGTCTTCACGAA 152095
| || | |||||| |||||
Sbjct 395617 CAGTCAAAGTCTTGACGAA 395599
>seq6
Length=1070623
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| ||||| | || | ||| || || |||||||||||||| || | |||||||| ||
Sbjct 959789 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 959730
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || ||||| | || || ||||| | | ||| || |||||
Sbjct 959729 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 959670
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || |||||| | || | |||| ||| || ||||| | |||||
Sbjct 959669 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 959610
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || || || | |||||| ||||| | ||||| ||
Sbjct 959609 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820681733368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |