Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7 123 6e-23 seq2 107 4e-18 seq6 102 2e-16 >seq7 Length=946563 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | ||||| || || |||||||||||||||| || |||||| ||||||||| Sbjct 343620 ACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 343561 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || |||||||| | |||||||| || | | || || ||||| |||||| Sbjct 343560 AGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGA 343501 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| | || | | || ||| || ||||| | ||| ||||| || Sbjct 343500 ATCTTACTCTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAAGTTATAGTCTTA 343441 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCTTACT 152116 || || | |||||| || || | |||||| | | |||||| Sbjct 343440 CCGGTTAAAGTCTTGACAAAAATCTGCATCCTGCTCTTACT 343400 >seq2 Length=1354397 Score = 107 bits (118), Expect = 4e-18 Identities = 144/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || |||||||||||||| |||| |||||||| || ||||| | Sbjct 395796 CAAG-TGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCA 395738 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | ||| |||||||| ||||||| Sbjct 395737 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAA 395678 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| |||||| | || | |||| ||| || ||||| | ||| || || || | Sbjct 395677 TCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTAC 395618 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | |||||| ||||| Sbjct 395617 CAGTCAAAGTCTTGACGAA 395599 >seq6 Length=1070623 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | ||| || || |||||||||||||| || | |||||||| || Sbjct 959789 TCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 959730 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| || ||||| Sbjct 959729 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 959670 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | |||| ||| || ||||| | ||||| Sbjct 959669 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 959610 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || || || | |||||| ||||| | ||||| || Sbjct 959609 AGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 959571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820681733368