Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 seq6 91.5 1e-13 seq7 82.4 5e-11 >seq2 Length=1354397 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/225 (70%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| ||| | |||| ||| || ||| ||||||||||||||||| ||| Sbjct 395819 ATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCG 395760 Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | ||| | |||| |||| ||||| || ||||||||||| | || || || | Sbjct 395759 GACAAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 395702 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||| || ||| | || ||||| | || Sbjct 395701 GTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGT--CAATAGTGTCAGAAGA 395644 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 ||| || |||| || || ||||| || || | ||||| ||||| Sbjct 395643 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 395599 >seq6 Length=1070623 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| ||| | |||| ||| | ||| ||||||||||||||||| || | Sbjct 959800 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 959741 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || || | | Sbjct 959740 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 959683 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||| ||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 959682 GGATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGT--CAATAGTGTCAGAAGATTC 959625 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 959624 GACTTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 959574 >seq7 Length=946563 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || || | || |||||| ||||| || | || ||||| |||||||||||||||| Sbjct 343638 CCACCACGCAATCTCAAAACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAATCGGAT 343579 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | | || || || ||||| || || |||||||| | ||||||||| | | Sbjct 343578 AGAGTT--CTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTCTGCTGATCAGGTG 343521 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | || ||||| || ||||| ||| || ||| | || || |||| ||||| Sbjct 343520 GAATCCCCTCCTTATCTTGAATCTTACTCTTGACATTGT--CAATAGTATCGGAAGATTC 343463 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || ||||| || || | ||||| || || || ||||| Sbjct 343462 GACTTCTAAAGTTATAGTCTTACCGGTTAAAGTCTTGACAAAAATCTGCAT 343412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990364900936