Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 201 8e-47 >seq2 Length=1777742 Score = 201 bits (222), Expect = 8e-47 Identities = 386/562 (69%), Gaps = 29/562 (5%) Strand=Plus/Minus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 || |||||||| ||||||||| || | ||||||||| || || ||||| |||||||| Sbjct 559184 TTGAGAGCATCGATGTGATCTTTGTAAACGTGAGCATCGCCCATGGTATGAATAAACTCA 559125 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 || || | | || |||||| |||| ||| || | ||| | ||| |||||| Sbjct 559124 CCCGGTTCCATATCGCAGACATGGGCAACCATCTTGGTCAGAAGCGCATACGATGCAATG 559065 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA----- 101852 || || |||||||||| ||||||||| ||||||||||||||| |||| |||| Sbjct 559064 TTGAAGGGCACTCCTAGTCCCATATCACAGGATCTTTGATACAGTAGACAAGAAAGTCTT 559005 Query 101853 -GCTTTCCAT---------CACAGACATAAAATTGACTTAATACATGACAAGGCGGCAAC 101902 ||||||||| || |||||| || ||| || |||||||| |||||||| Sbjct 559004 GGCTTTCCATTCTCAGGAAAACTGACATAGAACTGAGAAAAGACATGACATGGCGGCAAA 558945 Query 101903 ACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG 101962 |||| || | |||| |||||| |||| ||| | || ||||| || ||| || Sbjct 558944 GCCATCGATGGGAAATCTGGTGGATTCCATGCACTCATGATGATTCTTCTGTC-GTATGG 558886 Query 101963 TTTGTTTTTATAG-TATCA-ATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAAT 102020 ||||| || ||| | | | ||||| | ||||| |||| ||||| || | || | Sbjct 558885 ATTGTTCTT-TAGCTTTGAGATCAAATCGGCCAATTGATCAAATCCTTGGCCAGTGTAGT 558827 Query 102021 CGCGCCCAACACCT---TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAG 102077 || || | | | || |||| || || ||||||||||| ||||||||||| || | Sbjct 558826 CG---TCATCGCATGTCTTGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACCG 558770 Query 102078 GTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATC 102137 | || | |||||| ||| ||| || | || || || ||||| | | |||||||| Sbjct 558769 GCCCCAAATCTCCCTCACGTCTCTCGTGCAATCCCAGCTTATCAAGGTACTCTCTAGATC 558710 Query 102138 CATTCGCATCCCAAATGTGCACGCCAGCTGCT--GATAGCTCTTTGCTGTCAGTAGATCC 102195 |||| | |||||||| | || || ||||| ||||||| || | || ||| | || Sbjct 558709 CATTTCCCTCCCAAATTTTGACCCC--CTGCTCAGATAGCTTCTTACCATCTGTACAACC 558652 Query 102196 TCTGATAAACCACAACAGTTCT 102217 || ||||||| || ||| Sbjct 558651 AGAAATGAACCACAGTAGCTCT 558630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251164778008