Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 255 7e-63 seq8 183 4e-41 >seq5 Length=1457367 Score = 255 bits (282), Expect = 7e-63 Identities = 416/594 (70%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 |||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 || |||||||| || ||| || | ||| || || | ||||| || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATG 24310 ||| ||||| | || ||||| |||| | ||| ||| | | | | ||||| || Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| | |||||| |||||||||| ||| | ||| || | || || ||||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336 Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430 || | | | |||| || ||| || | ||| |||||||| || || ||| | Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 || || ||||||||||| || ||||| || || || |||||| |||| || | ||| Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456 Query 24491 CTGTACTTCTATAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548 || |||||| || ||| || || ||||||| ||||| ||||| || ||| ||| Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 24549 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 24605 ||||| || ||||| ||| | || ||| || ||||| ||| | | | |||||| Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 ||||||| ||||| || |||| ||| | ||||| | ||||| || || |||||||| Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634 Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 24719 | |||||| | ||| || ||||| |||| ||||| || | |||||||||| Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 183 bits (202), Expect = 4e-41 Identities = 500/763 (66%), Gaps = 8/763 (1%) Strand=Plus/Plus Query 54268 GATATANNNNCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTT 54327 |||||| ||| | | |||||| || ||| || ||| || || || || | || Sbjct 325621 GATATATGAACCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTT 325680 Query 54328 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 54387 ||| || | || ||| || || ||||| || || ||||| || |||||| |||| Sbjct 325681 AGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCAT 325740 Query 54388 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 54447 | | ||| ||||| |||||| || | || ||| || ||||| || | || || Sbjct 325741 GGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGG 325800 Query 54448 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTAT 54507 |||||| || | || || | || | ||||| || ||||| ||||| || || || Sbjct 325801 AGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGAT 325860 Query 54508 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 54567 || |||||| || || || || | ||| | ||| || ||||| | |||| ||| Sbjct 325861 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGAC 325920 Query 54568 CTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627 | ||||| |||||| || || |||| |||||| || |||||||||||| | Sbjct 325921 TTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAA 325980 Query 54628 --TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACT 54685 ||||| |||| || || | |||| | ||||| || | |||||||| |||||| || Sbjct 325981 GTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACA 326038 Query 54686 ACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACAT 54743 | ||||| | ||| || || || |||||||| ||| || || || || |||| Sbjct 326039 ATGTCCAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACAT 326096 Query 54744 AGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 54803 |||| || || || ||| || | | ||| |||| | || | ||||| | ||| | Sbjct 326097 AGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAG 326156 Query 54804 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 54863 | | |||||||||||||| | | | |||||||| ||||| || || | || Sbjct 326157 AGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCAC 326216 Query 54864 CTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGA 54923 |||| || | || | |||||||||| || || || || || | ||| | || | Sbjct 326217 AAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAA 326276 Query 54924 TAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATT 54983 | | | | || |||| || ||| ||||| ||| || || ||||| ||||| Sbjct 326277 TGATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAAC 326336 Query 54984 TTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTT 55026 | ||||| | || || || || ||| | |||| |||||| Sbjct 326337 GTGATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379 Score = 129 bits (142), Expect = 7e-25 Identities = 591/935 (63%), Gaps = 24/935 (3%) Strand=Plus/Plus Query 53381 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440 || ||| |||| || ||| ||||| ||||||| || | ||||| || || || Sbjct 324179 GAACCTTCATAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAA 324238 Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 | | ||| || || ||||||||||| | | |||||||| | ||||| | ||| Sbjct 324239 GAAGCGTGGTAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCA 324298 Query 53501 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560 |||||| | || | |||||| |||| || || || | ||||| | | | |||||| Sbjct 324299 AATGGAACACGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGT 324358 Query 53561 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 53620 || | |||| |||||||| || |||||| |||| || || || || ||| || | Sbjct 324359 CTGTTTCTCATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACC 324418 Query 53621 TTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---- 53676 || || | ||| | || || ||| | | | | || ||| ||||||| | Sbjct 324419 TTGTTCAAGTTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCAC 324478 Query 53677 -----TTGTCCATCTATTA-CAA-------ACATGTT--CAATGCAATAGATGCCAGATT 53721 | ||||| || | ||| ||| | | || || || || |||| || Sbjct 324479 TGGGTCTTACCATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTT 324537 Query 53722 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 53781 ||||||||| ||||| || | | || | | || ||| || | ||| | Sbjct 324538 ACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGA 324597 Query 53782 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 53841 || || || || || || | ||| || |||||| ||||||| ||||| || ||||| || Sbjct 324598 TTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCAT 324657 Query 53842 GAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTT 53901 |||||| |||||||| || | || ||||| | || || | ||| | |||| || Sbjct 324658 GAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTT 324717 Query 53902 TATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCG 53959 || | ||| || | | ||| |||| || ||| || |||||| || Sbjct 324718 GATAGT--CTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCA 324775 Query 53960 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 54019 || || |||||| ||| || ||| |||| ||| | | ||| | ||| || || Sbjct 324776 TCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCA 324835 Query 54020 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 54079 | || | || |||||||| || | ||| |||||||| || ||| || | |||||| Sbjct 324836 TTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTT 324895 Query 54080 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 54139 | | | || || || || ||||| | ||| | ||| | | || || | Sbjct 324896 GCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCG 324955 Query 54140 TGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 54199 ||||| ||||||||||| | | | | | || |||| |||||| || || ||||| | Sbjct 324956 TGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACA 325015 Query 54200 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 54259 || | ||| ||||| || | || | | ||| || || | || || || | ||| || Sbjct 325016 TAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTA 325075 Query 54260 GTCCCGGAGATATANNNNCCACTGGCACGAATATT 54294 || || | ||||| || | | |||||| || Sbjct 325076 GTACCTGCAATATATGAACCCGTAGAACGAATGTT 325110 Score = 105 bits (116), Expect = 8e-18 Identities = 348/538 (65%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 52798 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 52857 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 323424 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATACC 323483 Query 52858 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGG 52917 || || | ||| |||| ||||| ||||||||||| || | ||| | | || Sbjct 323484 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 323543 Query 52918 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 52977 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 323544 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 323603 Query 52978 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 53036 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 323604 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATC-CTTTAGTT 323662 Query 53037 CTTCTGGAAGGTT---TGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093 ||| |||| || | ||| || || || ||| ||| || || | ||| | Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 323722 Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153 | ||||| ||| | | ||| ||| | | || | | || || || | || Sbjct 323723 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 323782 Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213 | ||||| || || || || | |||| ||| ||||| || || || || | | ||| Sbjct 323783 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 323842 Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273 | || | || | ||| || | ||| || ||||| ||||| || |||| | ||| | Sbjct 323843 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 323902 Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 53331 |||||| ||| ||| |||| | | || | || ||||||| ||| |||||||| Sbjct 323903 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGA 323960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721540627840