Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 179 3e-40 >seq2 Length=1777742 Score = 179 bits (198), Expect = 3e-40 Identities = 343/502 (68%), Gaps = 25/502 (5%) Strand=Plus/Minus Query 97036 TGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATA 97095 ||||| |||||||||| ||||||| |||| ||||||||| || | || |||||| Sbjct 559190 TGCTCCTTGAGAGCATCGATGTGATCTTTGTAAACGTGAGCATCGCCCATGGTATGAATA 559131 Query 97096 AATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTA 97155 || || || || | | ||| ||||||||| | ||| || | || | ||| Sbjct 559130 AACTCACCCGGTTCCATATCGCAGACATGGGCAACCATCTTGGTCAGAAGCGCATACGAT 559071 Query 97156 GCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAA 97215 |||||||| || ||||| ||||||||||||||| ||||||||||| | |||| ||| Sbjct 559070 GCAATGTTGAAGGGCACTCCTAGTCCCATATCACAGGATCTTTGATACAGTAGACAAGAA 559011 Query 97216 A------GCTTTCCAT---------CACACACATAAAACTGACTCAATACATGACAGGGG 97260 | ||||||||| || ||||| |||||| || |||||||| || Sbjct 559010 AGTCTTGGCTTTCCATTCTCAGGAAAACTGACATAGAACTGAGAAAAGACATGACATGGC 558951 Query 97261 GGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCG 97320 ||||| ||||| ||| | |||| |||||| |||| ||| | |||||||| ||| Sbjct 558950 GGCAAAGCCATCGATGGGAAATCTGGTGGATTCCATGCACTCATGATGATTCTTCTGTCG 558891 Query 97321 GTTGGGTTTGTGTGTA----TGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCC 97376 ||| || | | || || || || ||| || |||||||||| |||| || Sbjct 558890 TATGGATTGTTCTTTAGCTTTGAGATCAA--ATCGGC--CAATTGATCAAATCCTTGGCC 558835 Query 97377 ACCATAATTGTGCT-TAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCAT 97435 | || | || | | |||| |||| || ||||||||||||||||| ||||||| Sbjct 558834 AGTGTAGTCGTCATCGCATGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCAT 558776 Query 97436 AAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACC 97495 |||| || || | ||||| || ||| || || || |||||||| | || | Sbjct 558775 AAACCGGCCCCAAATCTCCCTCACGTCTCTCGTGCAATCCCAGCTTATCAAGGTACTCTC 558716 Query 97496 TAGATCCATTTGCATCCCAAAT 97517 ||||||||||| | |||||||| Sbjct 558715 TAGATCCATTTCCCTCCCAAAT 558694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783966188560