Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 176 4e-39
seq1 89.7 5e-13
>seq5
Length=1457367
Score = 176 bits (194), Expect = 4e-39
Identities = 406/602 (67%), Gaps = 21/602 (3%)
Strand=Plus/Minus
Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593
||||||||||| | || || || |||| | || |||||| | ||| || | |||
Sbjct 1119690 CGTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCA 1119631
Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653
|| || ||||| ||||| | |||||| | || || || |||||| | |||||| ||
Sbjct 1119630 GAGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAAT 1119571
Query 57654 TCCCTCAAAGAATCTGAGAGAAATTTTATTAAACAC----GTGTTGGCGTTTTTCGCCGC 57709
|| | |||| || |||| || || | | | || ||||| || || || ||
Sbjct 1119570 AACC-GTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGC 1119512
Query 57710 ATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGAAGTGCAAGTG 57767
|| |||||||| || || |||||||| || | ||| ||||| |||||||||| |
Sbjct 1119511 CTCTGATGGTATAGTAAATGAGAATTTAGTTG--AGAATTTCAGTGCAGAAGTGCAAATT 1119454
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| || || | ||| ||||| || || ||| | || |||||| | || ||||| |
Sbjct 1119453 CCAGAAGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACC 1119394
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACG-TAGACTGTTC 57884
||||| || | || ||||| || | ||||| ||| | || || || | |||||
Sbjct 1119393 TATTCCCTGTTAATTGATACTTATATCAAGGATCCAA--AGGA-AAGCGATTTCTTGTTC 1119337
Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA 57944
|| |||||||||| || || ||| ||||||| || ||| | |||| ||||||
Sbjct 1119336 AATGCGATCGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATT 1119277
Query 57945 AAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001
| | || | | | ||||| ||||| | | || || || ||| | ||||||
Sbjct 1119276 CA---GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGT 1119220
Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061
|| |||||||| || |||||| || || || ||| ||||||| || || |||||
Sbjct 1119219 ATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCA 1119160
Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121
|| || |||||| ||||| ||||| | | || || ||| | ||||| ||||||||
Sbjct 1119159 GGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCA 1119100
Query 58122 TG 58123
||
Sbjct 1119099 TG 1119098
>seq1
Length=1865156
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
||| || || ||||| || || || |||||||| || || | ||||| || | ||| |
Sbjct 1271877 TTCGACCCGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCT 1271936
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
|| || ||||| ||| ||||||| | | | ||| || | | ||||||||||||
Sbjct 1271937 CATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCA 1271996
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
|||||||| || | | | | || || || ||||| ||||| |||||||| || ||
Sbjct 1271997 TGGCTCGAGATATATGCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATA 1272053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766355423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |