Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2 114 3e-20
seq8 98.7 2e-15
seq5 86.0 1e-11
>seq2
Length=1777742
Score = 114 bits (126), Expect = 3e-20
Identities = 284/426 (67%), Gaps = 25/426 (6%)
Strand=Plus/Plus
Query 35382 ACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTG 35441
|||| ||| |||||||||||||| || || || ||||| |||||| | ||||||||||
Sbjct 558743 ACGAGAGACGTGAGGGAGATTTGGGGCCGGTTTATGGATTTCAATGGAGGCATTTTGGTG 558802
Query 35442 CTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT- 35500
|| |||| | || || | ||| || ||||| | || |||||||||||||| ||
Sbjct 558803 CTAAATACAAGACATGCGATGACGACTACACTGGCCAAGGATTTGATCAATTGGCCGATT 558862
Query 35501 --ATACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGG 35557
|| |||| || | |||| |||||| | || ||||| || || |||| ||||||
Sbjct 558863 TGATCTCAAAG---CT-AAAGAACAATCCATACGACAGAAGAATCATCATGAGTGCATGG 558918
Query 35558 AATCCTATGGATCTTCACCT-TATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTA 35616
||||| ||| ||| | | |||||| | || ||||| || | | |||| || ||
Sbjct 558919 AATCCACCAGAT-TTCCCATCGATGGCTTTGCCGCCATGTCATGTCTTTTCTCAGTTCTA 558977
Query 35617 TGT---------GGCTAATGGAGA------ATTGTCGTGCCAGTTGTATCAGCGAAGCGG 35661
||| | |||||| | | | || || | ||||||| || | |
Sbjct 558978 TGTCAGTTTTCCTGAGAATGGAAAGCCAAGACTTTCTTGTCTACTGTATCAAAGATCCTG 559037
Query 35662 AGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGAT 35721
||| | || | || ||||||||||| |||||||| || | |||||||| | || |
Sbjct 559038 TGATATGGGACTAGGAGTGCCCTTCAACATTGCATCGTATGCGCTTCTGACCAAGATGGT 559097
Query 35722 GGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACAT 35781
||| | | | | | ||||||| |||||||| | || | || || || ||| |
Sbjct 559098 TGCCCATGTCTGCGATATGGAACCGGGTGAGTTTATTCATACCATGGGCGATGCTCACGT 559157
Query 35782 TTATAA 35787
||| ||
Sbjct 559158 TTACAA 559163
>seq8
Length=940994
Score = 98.7 bits (108), Expect = 2e-15
Identities = 184/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| ||| | || | || ||||| ||||| || || || || ||||| | ||||
Sbjct 325649 TGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTA 325708
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG- 94892
|| ||||||||||| ||| ||||| | | | | | ||||| || || || | ||
Sbjct 325709 TCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGA 325768
Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
||| ||| || ||| ||| || || || || |||||||| | || || | ||
Sbjct 325769 GGGCGTG-GAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGA 325827
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
||| |||| ||| || ||||| |||| | |||||| || ||||| || ||||| ||
Sbjct 325828 CATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAAC 325887
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040
| ||||||||| | ||||| || |||
Sbjct 325888 TCTCATAATCATATGTTGAGGACGTTCA 325915
>seq5
Length=1457367
Score = 86.0 bits (94), Expect = 1e-11
Identities = 165/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 102119 ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT-CACAGTTTCCCTGCCTGTTAA 102177
||| | |||||||||||| || ||| |||| | || || | | | || || |||
Sbjct 1118883 ATTATTACTGAAGCCGTCGAGATCGAA-AAGAGGTACTTCATCGATGCTCTACCCGTTTC 1118825
Query 102178 ATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACT 102237
||| |||| |||||| | | |||||| ||||||| |||| || || || |||| | |
Sbjct 1118824 TTTATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGATT 1118765
Query 102238 ATTGGTTGAAAT-GGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGG 102296
| |||| | | |||| | ||||| | || || || ||||| || |||||||
Sbjct 1118764 ACTGGTCGCCTTCGGGAACA-AAAAGTTTTTCAACGTGACTAACCCATTTGATTTCATGG 1118706
Query 102297 ACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCA 102354
| || || || || | ||||||||| ||||| |||||||||||| | || || ||
Sbjct 1118705 AGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGAGAGTCTCTGACTACCA 1118648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583898567640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |