Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 114 3e-20 seq8 98.7 2e-15 seq5 86.0 1e-11 >seq2 Length=1777742 Score = 114 bits (126), Expect = 3e-20 Identities = 284/426 (67%), Gaps = 25/426 (6%) Strand=Plus/Plus Query 35382 ACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTG 35441 |||| ||| |||||||||||||| || || || ||||| |||||| | |||||||||| Sbjct 558743 ACGAGAGACGTGAGGGAGATTTGGGGCCGGTTTATGGATTTCAATGGAGGCATTTTGGTG 558802 Query 35442 CTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT- 35500 || |||| | || || | ||| || ||||| | || |||||||||||||| || Sbjct 558803 CTAAATACAAGACATGCGATGACGACTACACTGGCCAAGGATTTGATCAATTGGCCGATT 558862 Query 35501 --ATACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGG 35557 || |||| || | |||| |||||| | || ||||| || || |||| |||||| Sbjct 558863 TGATCTCAAAG---CT-AAAGAACAATCCATACGACAGAAGAATCATCATGAGTGCATGG 558918 Query 35558 AATCCTATGGATCTTCACCT-TATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTA 35616 ||||| ||| ||| | | |||||| | || ||||| || | | |||| || || Sbjct 558919 AATCCACCAGAT-TTCCCATCGATGGCTTTGCCGCCATGTCATGTCTTTTCTCAGTTCTA 558977 Query 35617 TGT---------GGCTAATGGAGA------ATTGTCGTGCCAGTTGTATCAGCGAAGCGG 35661 ||| | |||||| | | | || || | ||||||| || | | Sbjct 558978 TGTCAGTTTTCCTGAGAATGGAAAGCCAAGACTTTCTTGTCTACTGTATCAAAGATCCTG 559037 Query 35662 AGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGAT 35721 ||| | || | || ||||||||||| |||||||| || | |||||||| | || | Sbjct 559038 TGATATGGGACTAGGAGTGCCCTTCAACATTGCATCGTATGCGCTTCTGACCAAGATGGT 559097 Query 35722 GGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACAT 35781 ||| | | | | | ||||||| |||||||| | || | || || || ||| | Sbjct 559098 TGCCCATGTCTGCGATATGGAACCGGGTGAGTTTATTCATACCATGGGCGATGCTCACGT 559157 Query 35782 TTATAA 35787 ||| || Sbjct 559158 TTACAA 559163 >seq8 Length=940994 Score = 98.7 bits (108), Expect = 2e-15 Identities = 184/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| ||| | || | || ||||| ||||| || || || || ||||| | |||| Sbjct 325649 TGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTA 325708 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG- 94892 || ||||||||||| ||| ||||| | | | | | ||||| || || || | || Sbjct 325709 TCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGA 325768 Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 ||| ||| || ||| ||| || || || || |||||||| | || || | || Sbjct 325769 GGGCGTG-GAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGA 325827 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| |||| ||| || ||||| |||| | |||||| || ||||| || ||||| || Sbjct 325828 CATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAAC 325887 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040 | ||||||||| | ||||| || ||| Sbjct 325888 TCTCATAATCATATGTTGAGGACGTTCA 325915 >seq5 Length=1457367 Score = 86.0 bits (94), Expect = 1e-11 Identities = 165/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 102119 ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT-CACAGTTTCCCTGCCTGTTAA 102177 ||| | |||||||||||| || ||| |||| | || || | | | || || ||| Sbjct 1118883 ATTATTACTGAAGCCGTCGAGATCGAA-AAGAGGTACTTCATCGATGCTCTACCCGTTTC 1118825 Query 102178 ATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACT 102237 ||| |||| |||||| | | |||||| ||||||| |||| || || || |||| | | Sbjct 1118824 TTTATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGATT 1118765 Query 102238 ATTGGTTGAAAT-GGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGG 102296 | |||| | | |||| | ||||| | || || || ||||| || ||||||| Sbjct 1118764 ACTGGTCGCCTTCGGGAACA-AAAAGTTTTTCAACGTGACTAACCCATTTGATTTCATGG 1118706 Query 102297 ACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCA 102354 | || || || || | ||||||||| ||||| |||||||||||| | || || || Sbjct 1118705 AGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGAGAGTCTCTGACTACCA 1118648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583898567640