Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq5 282 5e-71
seq8 188 9e-43
>seq5
Length=1457367
Score = 282 bits (312), Expect = 5e-71
Identities = 422/594 (71%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
|||||| |||||| || | ||| || ||||| | || ||||||||||||||||| ||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| |||||||| || ||| || | ||| || || | ||| || || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 33757
|| ||||| | |||||||| |||| | ||||||| | | | | ||||| ||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817
||||| | |||||| |||||||||| ||| | ||| || |||| || |||||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336
Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877
|| | | | |||| || ||| || | ||||||||| || || || ||| |
Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396
Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937
|| || ||||||||||| || || || || || || |||||| |||| || | |||
Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456
Query 33938 CTGCACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCT 33995
|||||||||| || ||| || || ||||||| ||||| ||||| |||||| |||
Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514
Query 33996 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 34052
||||| || ||||| ||| | || ||| || ||||| ||| | | | ||||||
Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574
Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112
||||||| ||||| || |||| ||| | ||||| | ||||| || || ||||||||
Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634
Query 34113 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 34166
| |||||| | ||| || ||||| |||| ||||||||| | ||||||||||
Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688
>seq8
Length=940994
Score = 188 bits (208), Expect = 9e-43
Identities = 496/753 (66%), Gaps = 8/753 (1%)
Strand=Plus/Plus
Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575
||| | | |||||| || ||| || ||| || || || || | ||||| || |
Sbjct 325631 CCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATA 325690
Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635
|| ||| || || || || || || || || ||| ||||| ||||| | |||
Sbjct 325691 GCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGG 325750
Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695
||||| |||||| || | || | ||| || ||||| || | || |||||||| ||
Sbjct 325751 AAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGA 325810
Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63755
| || || | || | ||||| || ||||||||||| || || || || |
Sbjct 325811 ATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCA 325870
Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815
||||| || || || || | ||| | ||| || ||||| | |||| | | || |||
Sbjct 325871 TGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCATTT 325930
Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63873
|| ||| || || || |||| |||||| || |||||||||||| | ||||| |
Sbjct 325931 ATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAAGTTGAAA--T 325988
Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGG 63933
||| || || | |||| | || || |||| |||||||| |||||| || || |||||
Sbjct 325989 CTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACAATGTCCAT-- 326046
Query 63934 TAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63991
| ||| || || || |||||||| ||| || || || || ||||||||||| ||
Sbjct 326047 AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTGAACAA 326106
Query 63992 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTAT 64051
|| || || | | ||| |||| | || | |||||| | ||| || || |||||
Sbjct 326107 TTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATAGCTAT 326166
Query 64052 TCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 64111
||| ||||| | | | |||||||| ||||| || || | || |||| ||
Sbjct 326167 TCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTTTCAGC 326226
Query 64112 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171
|||| | |||||||||| || || || || || | ||| | || ||| | |
Sbjct 326227 AGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATACGCTG 326286
Query 64172 AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCTAATACG 64231
| || |||| || ||| ||||| | | || || |||||||| || | |||||
Sbjct 326287 GGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGATATACG 326346
Query 64232 AGACGTGATTTTATCAAACATGACATTTTCCTT 64264
| || || || || ||| | |||| ||||||
Sbjct 326347 TGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379
Score = 113 bits (124), Expect = 6e-20
Identities = 352/539 (65%), Gaps = 7/539 (1%)
Strand=Plus/Plus
Query 62036 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62095
|||||| | ||||||||||| | ||| || |||| || || | || |||||||| ||
Sbjct 323424 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATACC 323483
Query 62096 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62155
|| || | ||| |||| ||||| ||||||||||| || | ||| | | ||
Sbjct 323484 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 323543
Query 62156 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62215
| | || || || |||| ||||| ||||||||| | | | | || || ||
Sbjct 323544 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 323603
Query 62216 CATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62274
||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | |
Sbjct 323604 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATC-CTTTAGTT 323662
Query 62275 CTTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331
||| |||| || | ||| || ||||| ||| ||| || || | ||| |
Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 323722
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391
| ||||| ||| | | ||| ||| | | || | | ||||| || | ||
Sbjct 323723 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 323782
Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451
||||||| || || || || | |||| ||| ||||| || || || || | |||
Sbjct 323783 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 323842
Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511
| || | || | ||| || | ||| || ||||| ||||| || |||| | ||| |
Sbjct 323843 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 323902
Query 62512 TTCTAAGACCGTATGTTCTGAT-TTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGA 62569
|||||| ||| ||| |||| || |||| | || ||||||| ||| ||||||||
Sbjct 323903 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTG-TCCCAATCCCATAGATCCGA 323960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817537018240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |