Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 >seq5 Length=1457367 Score = 163 bits (180), Expect = 3e-35 Identities = 400/597 (67%), Gaps = 16/597 (3%) Strand=Plus/Plus Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 ||| |||||||| |||||||||||| ||||| | || | ||| |||||||| |||| Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748 || ||||| | ||| || || | ||| || ||||||||||| ||||| |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--ATATACCTT--GTTGCTAG 11804 || || || | || ||||| || || | ||| ||| | | ||| || | | | Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 11805 ATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGT 11864 | |||||| | | ||||| || || |||| ||| | || |||| || || | Sbjct 1119277 A-ATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCAT 1119335 Query 11865 TAAATAAATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922 | || || | | | |||| | ||| | | ||| ||||| ||||| | ||| Sbjct 1119336 TGAACAA--GAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATA 1119393 Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982 | ||||| ||||| |||||||| ||||| || ||||| |||||| || |||| Sbjct 1119394 GGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGG 1119453 Query 11983 ACACTGTACATCCACA-TAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAG 12041 | || || || || | |||| | || |||||||||||||||| ||||||||| | Sbjct 1119454 AATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGG 1119512 Query 12042 ATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TTA 12097 ||||| || || | | | | || || || |||||| | | || || ||| Sbjct 1119513 CAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGT-TCTCATTCATACGGTTA 1119571 Query 12098 TCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACT 12157 | |||||||| | ||| || |||| ||| | ||||| | ||||| || ||| || Sbjct 1119572 TTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCT 1119631 Query 12158 GATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCTA 12214 | | |||||| || ||| || ||||| || || || ||||| | ||| || ||| Sbjct 1119632 GCTCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524753147520