Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 163 3e-35
>seq5
Length=1457367
Score = 163 bits (180), Expect = 3e-35
Identities = 400/597 (67%), Gaps = 16/597 (3%)
Strand=Plus/Plus
Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688
||| |||||||| |||||||||||| ||||| | || | ||| |||||||| ||||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748
|| ||||| | ||| || || | ||| || ||||||||||| ||||| ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--ATATACCTT--GTTGCTAG 11804
|| || || | || ||||| || || | ||| ||| | | ||| || | | |
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 11805 ATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGT 11864
| |||||| | | ||||| || || |||| ||| | || |||| || || |
Sbjct 1119277 A-ATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCAT 1119335
Query 11865 TAAATAAATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922
| || || | | | |||| | ||| | | ||| ||||| ||||| | |||
Sbjct 1119336 TGAACAA--GAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATA 1119393
Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982
| ||||| ||||| |||||||| ||||| || ||||| |||||| || ||||
Sbjct 1119394 GGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGG 1119453
Query 11983 ACACTGTACATCCACA-TAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAG 12041
| || || || || | |||| | || |||||||||||||||| ||||||||| |
Sbjct 1119454 AATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGG 1119512
Query 12042 ATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TTA 12097
||||| || || | | | | || || || |||||| | | || || |||
Sbjct 1119513 CAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGT-TCTCATTCATACGGTTA 1119571
Query 12098 TCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACT 12157
| |||||||| | ||| || |||| ||| | ||||| | ||||| || ||| ||
Sbjct 1119572 TTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCT 1119631
Query 12158 GATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCTA 12214
| | |||||| || ||| || ||||| || || || ||||| | ||| || |||
Sbjct 1119632 GCTCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524753147520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |