Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq5 269 3e-67
seq8 188 9e-43
>seq5
Length=1457367
Score = 269 bits (298), Expect = 3e-67
Identities = 419/594 (71%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216
|||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| ||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276
|| |||||||| || ||| || | ||| || || | ||||| || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATG 36333
||| ||||| | || ||||| |||| | ||||||| | | | ||||||| ||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393
||||| | |||||| |||||||||| ||| | ||| || | || || |||||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336
Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453
|| | | | |||| || ||| || | ||| |||||||| || || ||| |
Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396
Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513
|| || ||||||||||| || ||||| || || || |||||| |||| || | |||
Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456
Query 36514 CTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 36571
|| ||||||| || ||| || || ||||||| ||||| ||||| || ||| |||
Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514
Query 36572 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTC 36628
||||| || ||||| ||| | || ||| || ||||||| | | | | ||||||
Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574
Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688
||||||| ||||| || |||| ||| | ||||| | ||||| || || ||||||||
Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634
Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 36742
| |||||| | ||| || ||||| |||| ||||| || | ||||||||||
Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688
>seq8
Length=940994
Score = 188 bits (208), Expect = 9e-43
Identities = 501/763 (66%), Gaps = 8/763 (1%)
Strand=Plus/Plus
Query 66299 GATATANNNNCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 66358
|||||| ||| | | |||||| || ||| || ||| || || || || | ||
Sbjct 325621 GATATATGAACCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTT 325680
Query 66359 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 66418
||| || | || ||| || || ||||| || || ||||| || |||||| ||||
Sbjct 325681 AGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCAT 325740
Query 66419 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 66478
| | ||| ||||| |||||| || | || ||| || ||||| || | || ||
Sbjct 325741 GGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGG 325800
Query 66479 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 66538
|||||| || | || || | || | ||||| || ||||||||||| || || ||
Sbjct 325801 AGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGAT 325860
Query 66539 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 66598
|| |||||| || || || || | ||| | ||| || ||||| | |||| |||
Sbjct 325861 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGAC 325920
Query 66599 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658
| ||||| ||| || || || |||| |||||| || |||||||||||| |
Sbjct 325921 TTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAA 325980
Query 66659 --TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 66716
||||| |||| || || | |||| | ||||| || | |||||||| |||||| ||
Sbjct 325981 GTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACA 326038
Query 66717 ACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACAT 66774
| ||||| | ||| || || || |||||||| ||| || || || || ||||
Sbjct 326039 ATGTCCAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACAT 326096
Query 66775 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 66834
||||||| || || || || | | ||| |||| | || | ||||| | ||| |
Sbjct 326097 AGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAG 326156
Query 66835 ATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 66894
| | |||||||||||||| | | | |||||||| ||||| || || | ||
Sbjct 326157 AGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCAC 326216
Query 66895 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGA 66954
|||| || |||| | |||||||||| || || || || || | ||| | || |
Sbjct 326217 AAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAA 326276
Query 66955 TAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATT 67014
| | | | || |||| || ||| ||||| ||| || || ||||| |||||
Sbjct 326277 TGATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAAC 326336
Query 67015 TTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTT 67057
| ||||| | || || || || ||| | |||| ||||||
Sbjct 326337 GTGATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379
Score = 138 bits (152), Expect = 1e-27
Identities = 593/935 (63%), Gaps = 24/935 (3%)
Strand=Plus/Plus
Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471
|| ||| |||| || ||| ||||| ||||||| || | ||||| || || ||
Sbjct 324179 GAACCTTCATAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAA 324238
Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531
| | ||| || || ||||||||||| | | |||||||| | ||||| | |||
Sbjct 324239 GAAGCGTGGTAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCA 324298
Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591
|||||| | || | |||||| |||| || || || | ||||| | | | ||||||
Sbjct 324299 AATGGAACACGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGT 324358
Query 65592 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 65651
|| | |||| |||||||| || |||||| |||| || || || || ||| || |
Sbjct 324359 CTGTTTCTCATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACC 324418
Query 65652 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 65711
|| || | || | || || ||| | | | | || ||| ||||||| | | |
Sbjct 324419 TTGTTCAAGTTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCAC 324478
Query 65712 T---------CATCTATTA-CAA-------ACATGTT--CAATGCAACAGATGCCAGATT 65752
| |||| || | ||| ||| | | || || | || |||| ||
Sbjct 324479 TGGGTCTTACCATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTT 324537
Query 65753 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 65812
||||||||| ||||| || | | || | | || ||| || | ||| |
Sbjct 324538 ACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGA 324597
Query 65813 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 65872
|| || || || || || | ||| || |||||| ||||||| ||||| || ||||| ||
Sbjct 324598 TTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCAT 324657
Query 65873 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 65932
|||||| |||||||| || | |||||||| | || || | ||| | | |||| ||
Sbjct 324658 GAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTT 324717
Query 65933 TATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 65990
|| | ||| || | | ||| |||| || ||| || ||| || ||
Sbjct 324718 GATAGT--CTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCA 324775
Query 65991 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 66050
|| || |||||| ||| || ||| |||| ||| | | ||| | ||| || ||
Sbjct 324776 TCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCA 324835
Query 66051 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTG 66110
| || | || |||||||| || | ||| |||||||| || ||| || ||||||||
Sbjct 324836 TTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTT 324895
Query 66111 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAA 66170
| | | || || || || ||||| | ||| | ||| | | || ||
Sbjct 324896 GCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCG 324955
Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230
||||| ||||||||||| | || | | | || |||| |||||| || || ||||| |
Sbjct 324956 TGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACA 325015
Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290
|| | ||| ||||| || | || | | ||| || || | || || || ||||| ||
Sbjct 325016 TAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTA 325075
Query 66291 GTCCCGGAGATATANNNNCCACTTGCACGAATATT 66325
|| || | ||||| || | | |||||| ||
Sbjct 325076 GTACCTGCAATATATGAACCCGTAGAACGAATGTT 325110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172734182720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |