Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 273 3e-68 seq8 197 2e-45 >seq5 Length=1457367 Score = 273 bits (302), Expect = 3e-68 Identities = 419/594 (71%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 |||||| |||||| || | ||| || ||||| | || | |||||| |||||||| || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || |||||||| || ||| || | ||| || || | ||||| || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135 || ||||| | || ||||| ||||| | ||||||| | | | | | ||||| || Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | |||||| |||||||||| ||| | ||| || |||| || ||||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 || | | | |||| || ||| || | ||||||||| || || || ||| | Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || ||||||||||| || || || || || || |||||| |||| || | ||| Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456 Query 50316 CTGCACTTCTGTAC--AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 |||||||||| || ||| || ||| ||||||| ||||| ||||| || ||| ||| Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430 ||||| || ||||| ||| | || ||| | ||||||| | | | |||||| Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 ||||||| ||||| || |||| ||| | ||||| | ||||| || || |||||||| Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634 Query 50491 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 50544 | |||||| | ||| || ||||| |||| ||||||||| | |||||||||| Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 197 bits (218), Expect = 2e-45 Identities = 498/753 (66%), Gaps = 8/753 (1%) Strand=Plus/Plus Query 80188 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247 ||| | | |||||| || ||| || ||| || || || || | ||||| || | Sbjct 325631 CCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATA 325690 Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307 || ||| || || ||||| || || ||||| ||| ||||| ||||| | ||| Sbjct 325691 GCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGG 325750 Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 80367 ||||| |||||| || | || ||| || ||||| || | || |||||||| || Sbjct 325751 AAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGA 325810 Query 80368 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGA 80427 | || || | |||| ||||| || ||||||||||| || || || || | Sbjct 325811 ATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCA 325870 Query 80428 TGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTT 80487 ||||| || || || || | ||| | ||| || ||||| | |||| ||| | |||| Sbjct 325871 TGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCATTT 325930 Query 80488 ATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 80545 || ||| || ||||| |||| |||||| || |||||||||||| | ||||| | Sbjct 325931 ATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAAGTTGAAA--T 325988 Query 80546 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT-- 80603 ||| || || | |||| | ||||| || | |||||||| |||||| || | ||||| Sbjct 325989 CTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACAATGTCCATAA 326048 Query 80604 GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 80663 | | | || || || |||||||| ||| || || || || ||||||||||| || Sbjct 326049 CCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTGAACAA 326106 Query 80664 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 80723 || || || | | ||| |||| | || | |||||| | ||| || | ||||| Sbjct 326107 TTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATAGCTAT 326166 Query 80724 TCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 80783 ||| ||||| ||| | |||||||| ||||| || || | || |||| || Sbjct 326167 TCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTTTCAGC 326226 Query 80784 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 80843 |||| | |||||||||| || || || || || | ||| | || || | | Sbjct 326227 AGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATACGCTG 326286 Query 80844 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 80903 | || |||| || ||| ||||| ||| || || ||||| ||||| | ||||| Sbjct 326287 GGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGATATACG 326346 Query 80904 AGACGTGATTTTATCAAACATGACATTTTCCTT 80936 | || || || || ||| | |||| |||||| Sbjct 326347 TGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379 Score = 109 bits (120), Expect = 8e-19 Identities = 349/538 (65%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 323424 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATACC 323483 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 || || | ||| |||| ||||||||||||||||| || | ||| | | || Sbjct 323484 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 323543 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 323544 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 323603 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 78946 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 323604 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATC-CTTTAGTT 323662 Query 78947 CTTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 ||| |||| || | ||| || ||||| ||| ||| | || || | ||| | Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 323722 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | |||| ||| | | ||| ||| | | || | | || || || | || Sbjct 323723 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 323782 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | ||||| || || || || | |||| ||| ||||| || ||||| || | | | Sbjct 323783 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 323842 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || | || | ||| || | ||| || || |||||||| || |||| | ||| | Sbjct 323843 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 323902 Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241 |||||| ||| ||| |||| | | || | || ||||||||||| ||||| || Sbjct 323903 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGA 323960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268728173120