Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 1e-40
>seq5
Length=1457367
Score = 181 bits (200), Expect = 1e-40
Identities = 307/436 (70%), Gaps = 8/436 (2%)
Strand=Plus/Plus
Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930
||| |||||||| ||| | || |||||||| | || | |||||| ||||| ||||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990
|||||||| | ||| || || ||||| || || |||||||| || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGAT-GCTTTTTTGTTCG 14049
|| || |||| |||||||| || | |||| ||| | || ||| | || ||| |
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAA-GATAGATTCACTGTCCT 1119275
Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109
|||||| | |||||||||| | || | |||||| | || |||| || ||||
Sbjct 1119276 GAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCAT 1119335
Query 14110 TAAATAAATATTC-CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATA 14167
| || || | || ||| |||| | | ||||| || | |||||||| | | | |||
Sbjct 1119336 TGAACAAGAAATCGCTTTCCTTTGGATCCTTGATAT--AAGTATCAATTAACAGGGAATA 1119393
Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227
| || ||||| ||||||||||| || || ||||||||||| ||| ||||||| |
Sbjct 1119394 GGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGG 1119453
Query 14228 CCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14286
||| ||||| | | | |||| | || | ||||| ||||| |||||||||||| |
Sbjct 1119454 AATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGG 1119512
Query 14287 CTGCAAAAAATGCCAA 14302
| ||||| || |||||
Sbjct 1119513 CAGCAAAGAAGGCCAA 1119528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727952027200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |