Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 264 2e-65 seq8 194 2e-44 >seq5 Length=1457367 Score = 264 bits (292), Expect = 2e-65 Identities = 418/595 (70%), Gaps = 12/595 (2%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 |||||| |||||| || | ||| |||||||| | || |||||||| |||||||| || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || |||||||| || ||| || | ||| || |||| ||||| || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATG 42240 || ||||| | || ||||| |||| | ||||||| | | | ||||||| || Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | |||||| |||||||||| ||| | ||| || |||| || ||||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 || | | | |||| || ||| || | ||| ||||| || || || ||| | Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 ||||| ||||||||||| || || || || || || |||||| | || || | || Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456 Query 42421 CTGTACTTCTGTAC--AAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCT 42478 || ||||||| || ||| || ||| ||||||| || || ||||| || ||| ||| Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 42479 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATT 42534 ||||| || ||||| ||| | || ||| || |||||| | || || ||||| Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTC-TCATTCATACGGTTATT 1119573 Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594 |||||||| ||||| || |||| ||| | ||||| ||||||| || || || ||||| Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633 Query 42595 CTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTA 42649 | |||||| | ||| || ||||| |||| |||||||| | |||||||||| Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 194 bits (214), Expect = 2e-44 Identities = 496/751 (66%), Gaps = 8/751 (1%) Strand=Plus/Plus Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 ||| | | |||||| ||| ||| || ||| || || || || | ||||| || | Sbjct 325631 CCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATA 325690 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 || ||| || || ||||| || || ||||| || |||||| ||||| | ||| Sbjct 325691 GCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGG 325750 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 ||||| |||||| || | || ||| || ||||| || | || |||||||| || Sbjct 325751 AAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGA 325810 Query 72451 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGA 72510 | || || | |||| ||||| || ||||||||||| || || || || | Sbjct 325811 ATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCA 325870 Query 72511 TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT 72570 || || || || || || | ||| | |||||| ||||| | |||| ||| | |||| Sbjct 325871 TGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCACCATTT 325930 Query 72571 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 72628 || ||| || || || |||| |||||| || |||||||||||| | ||||| | Sbjct 325931 ATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAAGTTGAAA--T 325988 Query 72629 CTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCAT-- 72686 ||| || || | |||| | || || || | |||||||| |||||| || || ||||| Sbjct 325989 CTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACAATGTCCATAA 326048 Query 72687 GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 72746 | | | || || || |||||||| ||| || || || || ||||||||||| || Sbjct 326049 CCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTGAACAA 326106 Query 72747 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 72806 || || || | | ||| |||| | || | |||||| | ||| || | ||||| Sbjct 326107 TTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATAGCTAT 326166 Query 72807 TCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGC 72866 ||| ||||| | | | |||||||| ||||| || || | || |||| || Sbjct 326167 TCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTTTCAGC 326226 Query 72867 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 |||| | |||||||||| || || || || || | ||| | || || | | Sbjct 326227 AGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATACGCTG 326286 Query 72927 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 72986 | || |||| || ||| ||||| ||| || || ||||| ||||| | ||||| Sbjct 326287 GGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGATATACG 326346 Query 72987 AGACGTGATTTTATCAAACATAACATTTTCC 73017 | || || || || ||| |||||| |||| Sbjct 326347 TGCAGTAATCTTGTCGAACCTAACATGTTCC 326377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080