Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 2e-25
seq8 95.1 2e-14
>seq5
Length=1457367
Score = 131 bits (144), Expect = 2e-25
Identities = 384/582 (66%), Gaps = 10/582 (2%)
Strand=Plus/Minus
Query 124984 GTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTC 125043
|||||||| || || || |||| || ||||| |||||| || ||| || | ||
Sbjct 1119689 GTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAG 1119630
Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103
|||| || || ||||||| ||||||| | ||||| || ||||| | | |||||| | |
Sbjct 1119629 AGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAATA 1119570
Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163
||| ||| ||| | || || || || || | | |||||||||||||| | ||
Sbjct 1119569 ACCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCT 1119510
Query 125164 CCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA 125222
| ||||| || || || || ||| | ||||| | ||| | ||| || ||||||
Sbjct 1119509 CTGATGGTATAGTAAATGAGAATTTAGTTGAGA-ATTTCAGTGCAGAAGTGCAAATTCCA 1119451
Query 125223 GAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTAC 125282
|| | || ||||| || |||||||||||||| || ||| | ||||| || | ||
Sbjct 1119450 GAAGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTAT 1119391
Query 125283 TCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGC 125341
|| | ||||| | || || ||||| || | || | | | | || || ||
Sbjct 1119390 TCCCTGTTAATTGATACTTATATCAAGGATCC-AAAGGAAAGCGATTTCTTGTTCAATGC 1119332
Query 125342 AATCGACACGGTGCCGTCTATACGTAAA---AAGGCTCAATGGGTGATTCGGTGGATCGA 125398
||||| | | || || | | |||| ||||| |||||| || | ||||| |
Sbjct 1119331 GATCGAAAACATTCC-TC-AGA-TTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCA 1119275
Query 125399 TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTT 125458
||| | ||| | ||| || ||| |||| || || || ||| | || || || ||
Sbjct 1119274 GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTATTTT 1119215
Query 125459 CTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACT 125518
|||||| ||| ||||| || ||||| ||| | |||||| || || ||||| || ||
Sbjct 1119214 CTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCT 1119155
Query 125519 GACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACA 125560
||| |||||| || || | |||| || || ||||
Sbjct 1119154 AACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 1119113
>seq8
Length=940994
Score = 95.1 bits (104), Expect = 2e-14
Identities = 312/475 (66%), Gaps = 10/475 (2%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| || || || ||| ||||||| ||| | || | ||||||||||| |||||||| |||
Sbjct 325008 CAAGGTGGTAACAAAAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGAC 324949
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
| ||||| || || || || || || ||| || |||||| || || || ||
Sbjct 324948 ATCTTTGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAGAGATTCGTGCAAGAGAT 324889
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
||||| || |||||| | ||||||||||||||||| || || | || ||| |
Sbjct 324888 TTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAA 324829
Query 97056 TGGAGCCTAATGTGCCCCGACT-CGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTT 97114
|||| | | | | || | | | || ||| |||| ||| | || || || ||
Sbjct 324828 TGGA-CTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATT 324770
Query 97115 TGAGGCC--AAGTACACGGCCTACG-AGCAAGAGGGC-CGATACGTGAGACGAGTCGATG 97170
||| ||| | | ||| |||| || ||| | | || | |||| | || | |
Sbjct 324769 TGAAGCCTTATATGAACG--TTACGTCGCTGAAGGTCGTGGTA-GAAAGACTA-TCAAAG 324714
Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230
| | | |||||||| | || ||| || |||| ||||||||| || || | ||| |
Sbjct 324713 CTCAAAAACTGTGGTACGCTATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGC 324654
Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290
| ||||| ||| || || || ||||||||| ||||||| || || || ||
Sbjct 324653 TTTACAAAGATGCCTGTAACATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCT 324594
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
| || |||| ||||| || |||||| | | || || ||||| || |||||
Sbjct 324593 CTAACTTGTGTTGTGAAATCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTG 324539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059125894080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |