Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 131 2e-25 seq8 95.1 2e-14 >seq5 Length=1457367 Score = 131 bits (144), Expect = 2e-25 Identities = 384/582 (66%), Gaps = 10/582 (2%) Strand=Plus/Minus Query 124984 GTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTC 125043 |||||||| || || || |||| || ||||| |||||| || ||| || | || Sbjct 1119689 GTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAG 1119630 Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 |||| || || ||||||| ||||||| | ||||| || ||||| | | |||||| | | Sbjct 1119629 AGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAATA 1119570 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163 ||| ||| ||| | || || || || || | | |||||||||||||| | || Sbjct 1119569 ACCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCT 1119510 Query 125164 CCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA 125222 | ||||| || || || || ||| | ||||| | ||| | ||| || |||||| Sbjct 1119509 CTGATGGTATAGTAAATGAGAATTTAGTTGAGA-ATTTCAGTGCAGAAGTGCAAATTCCA 1119451 Query 125223 GAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTAC 125282 || | || ||||| || |||||||||||||| || ||| | ||||| || | || Sbjct 1119450 GAAGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTAT 1119391 Query 125283 TCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGC 125341 || | ||||| | || || ||||| || | || | | | | || || || Sbjct 1119390 TCCCTGTTAATTGATACTTATATCAAGGATCC-AAAGGAAAGCGATTTCTTGTTCAATGC 1119332 Query 125342 AATCGACACGGTGCCGTCTATACGTAAA---AAGGCTCAATGGGTGATTCGGTGGATCGA 125398 ||||| | | || || | | |||| ||||| |||||| || | ||||| | Sbjct 1119331 GATCGAAAACATTCC-TC-AGA-TTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCA 1119275 Query 125399 TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTT 125458 ||| | ||| | ||| || ||| |||| || || || ||| | || || || || Sbjct 1119274 GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTATTTT 1119215 Query 125459 CTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACT 125518 |||||| ||| ||||| || ||||| ||| | |||||| || || ||||| || || Sbjct 1119214 CTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCT 1119155 Query 125519 GACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACA 125560 ||| |||||| || || | |||| || || |||| Sbjct 1119154 AACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 1119113 >seq8 Length=940994 Score = 95.1 bits (104), Expect = 2e-14 Identities = 312/475 (66%), Gaps = 10/475 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || ||| ||||||| ||| | || | ||||||||||| |||||||| ||| Sbjct 325008 CAAGGTGGTAACAAAAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGAC 324949 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 | ||||| || || || || || || ||| || |||||| || || || || Sbjct 324948 ATCTTTGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAGAGATTCGTGCAAGAGAT 324889 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 ||||| || |||||| | ||||||||||||||||| || || | || ||| | Sbjct 324888 TTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAA 324829 Query 97056 TGGAGCCTAATGTGCCCCGACT-CGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTT 97114 |||| | | | | || | | | || ||| |||| ||| | || || || || Sbjct 324828 TGGA-CTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATT 324770 Query 97115 TGAGGCC--AAGTACACGGCCTACG-AGCAAGAGGGC-CGATACGTGAGACGAGTCGATG 97170 ||| ||| | | ||| |||| || ||| | | || | |||| | || | | Sbjct 324769 TGAAGCCTTATATGAACG--TTACGTCGCTGAAGGTCGTGGTA-GAAAGACTA-TCAAAG 324714 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | | |||||||| | || ||| || |||| ||||||||| || || | ||| | Sbjct 324713 CTCAAAAACTGTGGTACGCTATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGC 324654 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||| ||| || || || ||||||||| ||||||| || || || || Sbjct 324653 TTTACAAAGATGCCTGTAACATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCT 324594 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 | || |||| ||||| || |||||| | | || || ||||| || ||||| Sbjct 324593 CTAACTTGTGTTGTGAAATCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTG 324539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059125894080