Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq5 187 2e-42 >seq5 Length=1457367 Score = 187 bits (206), Expect = 2e-42 Identities = 379/553 (69%), Gaps = 15/553 (3%) Strand=Plus/Plus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 |||||||||||| || || ||||||||||| | || | ||||| ||||| ||||| Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 ||| ||||| || ||| || || | ||| || ||||||||||| ||||| ||||| || Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACT-- 13326 || ||||||| || ||||| || | ||| || || | || | || || ||| Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTC----TGCGAAGATAGATTCACTGT 1119272 Query 13327 -CTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAA-CGCAGTTCATATTTTCTATT 13384 || ||||| | | ||||| | || || | ||||| | || || ||||| || Sbjct 1119273 CCTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCGATC 1119331 Query 13385 GCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTA 13444 || || || || ||| ||||||| || ||||||||||| || || | | | Sbjct 1119332 GCATTGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAA 1119391 Query 13445 TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCT 13504 || | ||||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| Sbjct 1119392 TAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCT 1119451 Query 13505 GATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACT 13563 | | || ||||| | | | |||| | || |||| || || || ||||| || ||| Sbjct 1119452 GGAATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGA 1119510 Query 13564 AGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-AC--TT 13620 |||||||| || || | | | || || | ||||||| || || || || Sbjct 1119511 GGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTT 1119570 Query 13621 TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAAC 13680 |||||| ||| ||| || |||| ||| | ||| || | ||||| || ||||| | Sbjct 1119571 ATTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTC 1119630 Query 13681 AGCCTTCTTATAC 13693 || |||||||| Sbjct 1119631 TGCTCTCTTATAC 1119643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982357979216