Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5 210 5e-49 >seq5 Length=1457367 Score = 210 bits (232), Expect = 5e-49 Identities = 299/417 (72%), Gaps = 13/417 (3%) Strand=Plus/Minus Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935 ||||||||| || || || ||| |||| ||||| ||| || ||| || || ||||| || Sbjct 1119508 TGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCAGAAGTGCAAATTCCAGA 1119449 Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995 ||| | ||||||||| || ||||| || || ||||| ||||| ||||||| || Sbjct 1119448 AGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATTC 1119389 Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055 || ||||| ||||||||||| | ||| ||| | |||| | | | || ||| || Sbjct 1119388 CCTGTTAATTGATACTTATATCAAGGATC-CAAAGGAAAGCGA----TTTCTTGTTCAAT 1119334 Query 269056 GAGAACTATGGACTGTGTGAGa--aaa---aaaTCTGAATGGGCTCTGAAATGGATAAAC 269110 | || | | | | ||| ||| || | ||||||||| | | |||||| | Sbjct 1119333 GCGATCGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAG 1119274 Query 269111 GATAGCGCGCCT---TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTC 269167 || || | || | || ||| || || ||||||||||| || | |||||||| ||| Sbjct 1119273 GACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTATTTTC 1119214 Query 269168 TTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTA 269227 ||||| || || ||||| |||||||| ||||||||||| | ||| || |||||||| || Sbjct 1119213 TTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTA 1119154 Query 269228 ACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 || || |||||||||||||| |||| || ||||||||||| ||| || || ||| Sbjct 1119153 ACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATGT 1119097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398281981664