Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7 132 8e-27
seq4 129 9e-26
>seq7
Length=1129221
Score = 132 bits (146), Expect = 8e-27
Identities = 191/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||| |||||||||| ||||| ||||| |||||||||||
Sbjct 502280 GCCAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 502338
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| |
Sbjct 502339 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 502398
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | | ||| ||||||| ||| | | | ||||| |||||| || || || ||
Sbjct 502399 TAGAGCTGTCTTGAAGACTTTCTTGGAATCTGTTATTAGAGATGCTGTCACTTACACAGA 502458
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | ||||||||||| || | ||| | || ||||| ||||| | |||||
Sbjct 502459 ACACGCTAAGAGAAAGACTGTCACTTCTCTTGATGTTGTGTATGCTTTGAAGAGACAAGG 502518
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
| | | |||||||| || ||||
Sbjct 502519 TAGAACCTTGTATGGTTTCGGTGGTTA 502545
>seq4
Length=1349144
Score = 129 bits (142), Expect = 9e-26
Identities = 191/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||| |||||||||| ||||| ||||| |||||||||||
Sbjct 847302 GCCAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 847244
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| |
Sbjct 847243 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 847184
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | |||| | |||| ||||| || |||| ||| |||||| | || || ||
Sbjct 847183 CAGAGCTGTTCTAAAGACTTTCCTTGAGTCCGTCATCAGAGATGCTGTTACTTACACGGA 847124
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | ||||| || || || ||||| | |||||||| ||||| | |||||
Sbjct 847123 ACACGCCAAGAGAAAGACCGTTACTTCTTTGGATGTTGTCTATGCCTTGAAGAGACAAGG 847064
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 847063 TAGAACCTTGTATGGTTTCGGTGGTTAA 847036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075192685544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |