Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq5 170 2e-37
>seq5
Length=1457367
Score = 170 bits (188), Expect = 2e-37
Identities = 395/594 (66%), Gaps = 9/594 (2%)
Strand=Plus/Plus
Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534
|||||||||||| ||| ||||||||||| || | || ||||| |||||||| ||||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594
||| ||||||| ||| |||| || ||||| || || | ||||| | |||||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654
||| || |||| ||||||||| ||||| |||| || || | ||||||| | |||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTT 21714
|||||| | ||||||| ||||| |||||||| | ||| | || || || ||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336
Query 21715 TAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACA 21773
|| |||| || |||| | | ||| | || |||
Sbjct 1119337 GAACAAGA-AATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGG 1119395
Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAAC 21833
| || || || || ||||| ||| || || || || ||||||||| | || |||| |
Sbjct 1119396 TCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAA 1119455
Query 21834 ATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCG 21892
||| || || | | | |||| | | | || || ||||||||||| |||||| |||
Sbjct 1119456 TTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514
Query 21893 GCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTT 21948
||||| || ||||| | | || ||| ||| |||||| || || || || ||
Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTC-ATTCATACGGTTATT 1119573
Query 21949 CCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGC 22008
|||||| | ||| || |||| ||| | ||||| | ||||| || ||| ||
Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633
Query 22009 CTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062
| |||||| ||| || |||| ||| | ||||| |||| ||||| ||
Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCT 1119687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900746809920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |