Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 170 2e-37 >seq5 Length=1457367 Score = 170 bits (188), Expect = 2e-37 Identities = 395/594 (66%), Gaps = 9/594 (2%) Strand=Plus/Plus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 |||||||||||| ||| ||||||||||| || | || ||||| |||||||| |||| Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 ||| ||||||| ||| |||| || ||||| || || | ||||| | ||||||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654 ||| || |||| ||||||||| ||||| |||| || || | ||||||| | ||| Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTT 21714 |||||| | ||||||| ||||| |||||||| | ||| | || || || || Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336 Query 21715 TAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACA 21773 || |||| || |||| | | ||| | || ||| Sbjct 1119337 GAACAAGA-AATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGG 1119395 Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAAC 21833 | || || || || ||||| ||| || || || || ||||||||| | || |||| | Sbjct 1119396 TCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAA 1119455 Query 21834 ATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCG 21892 ||| || || | | | |||| | | | || || ||||||||||| |||||| ||| Sbjct 1119456 TTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 21893 GCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTT 21948 ||||| || ||||| | | || ||| ||| |||||| || || || || || Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTC-ATTCATACGGTTATT 1119573 Query 21949 CCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGC 22008 |||||| | ||| || |||| ||| | ||||| | ||||| || ||| || Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633 Query 22009 CTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 | |||||| ||| || |||| ||| | ||||| |||| ||||| || Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCT 1119687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900746809920