Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 255 7e-63 seq8 188 9e-43 >seq5 Length=1457367 Score = 255 bits (282), Expect = 7e-63 Identities = 416/594 (70%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 |||||| |||||| || | ||| || ||||| | || | |||||| |||||||| || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || |||||||| || ||| || | ||| || || | ||| || || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 33479 || ||||| | |||||||| |||| | ||||||| | | | | ||||| || Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | |||||| |||||||||| ||| | ||| || |||| || ||||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 || | | | |||| || ||| || | ||||||||| || || || ||| | Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || || ||||||||||| || || || || || || |||||| |||| || | ||| Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456 Query 33660 CTGTACTTCTGTAC--AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCT 33717 || ||||||| || ||| || || | ||||| ||||| ||||| || ||| ||| Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 33718 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 33774 ||||| || ||||| ||| | || ||| || ||||| ||| | | | |||||| Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574 Query 33775 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33834 ||||||| ||||| || |||| ||| | ||||| | ||||| || || |||||||| Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634 Query 33835 TTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTA 33888 | |||||| | ||| || |||| |||| ||||||||| | |||||||||| Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 188 bits (208), Expect = 9e-43 Identities = 501/763 (66%), Gaps = 8/763 (1%) Strand=Plus/Plus Query 63455 GATATANNNNCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63514 |||||| ||| | | |||||| || ||| || ||| || || || || | || Sbjct 325621 GATATATGAACCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTT 325680 Query 63515 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCAT 63574 ||| || | || ||| || || || || || |||||||| ||| ||||| |||| Sbjct 325681 AGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCAT 325740 Query 63575 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63634 | | ||| ||||| |||||| || | || ||| || ||||| || | || || Sbjct 325741 GGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGG 325800 Query 63635 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63694 |||||| || | || || | || | ||||| || ||||||||||| || || || Sbjct 325801 AGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGAT 325860 Query 63695 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63754 || |||||| || || || || | ||| | ||| || ||||| | |||| ||| Sbjct 325861 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGAC 325920 Query 63755 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63814 | ||||| ||| || || || |||| |||||| || |||||||||||| | Sbjct 325921 TTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAA 325980 Query 63815 --TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63872 ||||| |||| || || | |||| | ||||| || | |||||||| |||||| || Sbjct 325981 GTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACA 326038 Query 63873 ATATCCAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 63930 || ||||| | | | || || || |||||||| ||| || || || || |||| Sbjct 326039 ATGTCCATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACAT 326096 Query 63931 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 63990 ||||||| || || || || | | ||| |||| | || | |||||| | ||| | Sbjct 326097 AGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAG 326156 Query 63991 ATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 64050 | | |||||||| ||||| | | | |||||||| ||||| || || | || Sbjct 326157 AGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCAC 326216 Query 64051 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAA 64110 |||| || |||| | |||||||||| || || || || || | ||| | || || Sbjct 326217 AAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAA 326276 Query 64111 TAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATT 64170 | | | | || |||| || ||| ||||| | | || || ||||| ||||| Sbjct 326277 TGATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAAC 326336 Query 64171 TTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTT 64213 | ||||| | || || || || ||| | |||| |||||| Sbjct 326337 GTGATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379 Score = 152 bits (168), Expect = 6e-32 Identities = 596/935 (64%), Gaps = 24/935 (3%) Strand=Plus/Plus Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 || ||| |||| || ||| ||||| ||||||| || | ||||| || || || Sbjct 324179 GAACCTTCATAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAA 324238 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 | | ||| || || ||||||||||| | | |||||||| | ||||| | ||| Sbjct 324239 GAAGCGTGGTAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCA 324298 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 |||||| | || | |||||| |||| || || || | ||||| | | | |||||| Sbjct 324299 AATGGAACACGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGT 324358 Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62807 || | |||| |||||||| || |||||| |||| || || || || ||| || | Sbjct 324359 CTGTTTCTCATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACC 324418 Query 62808 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 62867 || || | || | || || ||| | | | | || ||| ||||||| | | | Sbjct 324419 TTGTTCAAGTTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCAC 324478 Query 62868 ---------CCATCTATTA-CAA-------ACATGTT--CAAGGCAACAGATGCCAGATT 62908 ||||| || | ||| ||| | | || || | || |||| || Sbjct 324479 TGGGTCTTACCATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTT 324537 Query 62909 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 62968 ||||||||| ||||| || | | || | | || ||| || | ||| | Sbjct 324538 ACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGA 324597 Query 62969 CTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 63028 || ||||| || || || | ||| || |||||| ||||||| ||||| || ||||| || Sbjct 324598 TTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCAT 324657 Query 63029 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 63088 |||||| |||||||| || | |||||||| | || || | ||| | | |||| || Sbjct 324658 GAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTT 324717 Query 63089 TATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63146 || | ||| || | | | ||| |||| || ||| || ||| || || Sbjct 324718 GATAGT--CTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCA 324775 Query 63147 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63206 || || |||||| ||| || ||| |||| ||| | | ||| | ||| || || Sbjct 324776 TCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCA 324835 Query 63207 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63266 | || | || |||||||| || | ||| |||||||| || ||| || | |||||| Sbjct 324836 TTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTT 324895 Query 63267 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63326 | | | || || || || ||||| | ||| | ||| | | || || | Sbjct 324896 GCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCG 324955 Query 63327 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63386 ||||| ||||||||||| | || | | | || |||| |||||| || || ||||| | Sbjct 324956 TGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACA 325015 Query 63387 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63446 || | ||| ||||| || | || | | ||| || || | ||||| || |||| || Sbjct 325016 TAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTA 325075 Query 63447 GTACCGGAGATATANNNNCCACTGGCACGAATATT 63481 ||||| | ||||| || | | |||||| || Sbjct 325076 GTACCTGCAATATATGAACCCGTAGAACGAATGTT 325110 Score = 109 bits (120), Expect = 7e-19 Identities = 349/538 (65%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 61985 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62044 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 323424 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATACC 323483 Query 62045 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62104 || || | ||| |||| ||||| ||||||||||| || | ||| | | || Sbjct 323484 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 323543 Query 62105 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62164 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 323544 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 323603 Query 62165 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62223 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 323604 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATC-CTTTAGTT 323662 Query 62224 CTTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 ||| |||| || | ||| || ||||| ||| ||| | || || | ||| | Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 323722 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | ||||| ||| | | ||| ||| | | || | | || || || | || Sbjct 323723 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 323782 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 | ||||| || || || || | |||| ||| ||||| || || || || | ||| Sbjct 323783 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 323842 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 | || | || | ||| || | ||| || ||||| ||||| || |||| | ||| | Sbjct 323843 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 323902 Query 62461 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 62518 |||||| ||| ||| |||| | | || | || ||||||| ||| |||||||| Sbjct 323903 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGA 323960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947137705280